Protein Alignment spn-A and Rad51d

DIOPT Version :9

• Sequence 1: NP_524583.1
• Gene: spn-A / 43577
• FlyBaseID: FBgn0003479
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001100499.1
• Gene: Rad51d / 303375
• RGDID: 1306944
• Length: 329
• Species: Rattus norvegicus
• Alignment Length: 311
• Identity: 81/311 - (26%)
• Similarity: 130/311 - (41%)
• Gaps: 42/311 - (13%)

  Fly    30 ITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGG---KVEQIITEANKLVPLGFLSARTFYQ 91
            :|.:.::||:...:.||..:|.|..:::....||...   .:.:::.......||.  .|..:.:
  Rat    12 LTEEIVQLLRGRKIKTVADLAAADLEEVAQKCGLSYKALVALRRVLLAQFSAFPLN--GADLYEE 74

  Fly    92 MRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMY 156
            ::.....||||...|||||..|:.||.:|||.|....||||:|..:|......:.|     ..:|
  Rat    75 LKTSTAILSTGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVCLCVAANVAHSLQQ-----NVLY 134

  Fly   157 IDTENTFRPERLAAIAQRYKLNE---SEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYA---- 214
            :|:.......||..:.|....:|   :..|..:....:.:..|...::|...|.:.:...|
  Rat   135 VDSNGGMTASRLLQLLQARTQDEEKQASALQRIQVVHSFDIFQMLDMLQDLRGTMAQQATASSGT 199

  Fly   215 --LLIVDSAMALYRSDYIGRGELAARQNHLGLFLRM-----LQRLADEFGVAVVITNQVTASLDG 272
              ::||||..|:.       ..|...|...||.|.|     |:.||.:.|||||:||.:|...|.
  Rat   200 VKVVIVDSVTAVV-------APLLGGQQREGLALMMQLARELKILARDLGVAVVVTNHLTRDRDS 257

  Fly   273 APGMFDAKKPIGGHIMAHSSTTRLYLR--KGKG----ETRICKIYDSPCLP 317
            .     ..||..|...:...:||:.|.  :|.|    ..|..::..||..|
  Rat   258 R-----RFKPALGRSWSFVPSTRILLEVFEGAGTLGRSQRTVRLIKSPRQP 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-A	NP_524583.1	recomb_RAD51	22..335	CDD:274048	81/311 (26%)
		HHH_5	30..77	CDD:291205	9/49 (18%)
		Rad51_DMC1_radA	99..331	CDD:238543	69/239 (29%)
Rad51d	NP_001100499.1	recomb_radA	10..305	CDD:131290	81/311 (26%)
		Rad51_DMC1_radA	82..318	CDD:238543	69/239 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810