Protein Alignment spn-A and dmc1

DIOPT Version :10

• Sequence 1: NP_524583.1
• Gene: spn-A / 43577
• FlyBaseID: FBgn0003479
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_594166.1
• Gene: dmc1 / 2542106
• PomBaseID: SPAC8E11.03C
• Length: 332
• Species: Schizosaccharomyces pombe
• Alignment Length: 332
• Identity: 156/332 - (46%)
• Similarity: 216/332 - (65%)
• Gaps: 14/332 - (4%)

  Fly     9 AQQEEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQIIT 73
            |:..::|:.....:..|....|...||..|:||.:.||:.|..:||:.|:.|.|....||:::..
pombe     5 AEGNDDEQMIFSDIEDLTAHGIGMTDIIKLKQAGVCTVQGVHMSTKRFLLKIKGFSEAKVDKLKE 69

  Fly    74 EANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLA 138
            .|:|:.|..|.:|....|.|..|..:||||:.|:.:|||||::.||||:||||||||||:.|||.
pombe    70 AASKMCPANFSTAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLC 134

  Fly   139 VTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQ----TK 199
            ||.|||....|.|||..:||||.||||:|:.|||:|:.::..:.::|:..:||:||:||    ||
pombe   135 VTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYITK 199

  Fly   200 LIQMAAGMLF--ESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVI 262
            |     |.:|  :.:|.||||||.|||:|.||.|||||:.||..|.:.|..|..:::||.|||.:
pombe   200 L-----GTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISEEFNVAVFV 259

  Fly   263 TNQVTASLDGAPGMF--DAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESEAMFAI 325
            ||||.|. .||..||  :.:||:|||:|||:|.|||.||||:||.|:.|:.|||.:||:|..:.|
pombe   260 TNQVQAD-PGAAMMFASNDRKPVGGHVMAHASATRLLLRKGRGEERVAKLNDSPDMPEAECSYVI 323

  Fly   326 LPDGIGD 332
            .|.||.|
pombe   324 TPGGIAD 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-A	NP_524583.1	recomb_RAD51	22..335	CDD:274048	154/319 (48%)
dmc1	NP_594166.1	recomb_DMC1	18..331	CDD:131292	154/319 (48%)