Protein Alignment spn-A and dmc1

DIOPT Version :9

• Sequence 1: NP_524583.1
• Gene: spn-A / 43577
• FlyBaseID: FBgn0003479
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_594166.1
• Gene: dmc1 / 2542106
• PomBaseID: SPAC8E11.03c
• Length: 332
• Species: Schizosaccharomyces pombe
• Alignment Length: 332
• Identity: 156/332 - (46%)
• Similarity: 216/332 - (65%)
• Gaps: 14/332 - (4%)

  Fly     9 AQQEEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQIIT 73
            |:..::|:.....:..|....|...||..|:||.:.||:.|..:||:.|:.|.|....||:::..
pombe     5 AEGNDDEQMIFSDIEDLTAHGIGMTDIIKLKQAGVCTVQGVHMSTKRFLLKIKGFSEAKVDKLKE 69

  Fly    74 EANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLA 138
            .|:|:.|..|.:|....|.|..|..:||||:.|:.:|||||::.||||:||||||||||:.|||.
pombe    70 AASKMCPANFSTAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLC 134

  Fly   139 VTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQ----TK 199
            ||.|||....|.|||..:||||.||||:|:.|||:|:.::..:.::|:..:||:||:||    ||
pombe   135 VTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYITK 199

  Fly   200 LIQMAAGMLF--ESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVI 262
            |     |.:|  :.:|.||||||.|||:|.||.|||||:.||..|.:.|..|..:::||.|||.:
pombe   200 L-----GTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISEEFNVAVFV 259

  Fly   263 TNQVTASLDGAPGMF--DAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESEAMFAI 325
            ||||.|. .||..||  :.:||:|||:|||:|.|||.||||:||.|:.|:.|||.:||:|..:.|
pombe   260 TNQVQAD-PGAAMMFASNDRKPVGGHVMAHASATRLLLRKGRGEERVAKLNDSPDMPEAECSYVI 323

  Fly   326 LPDGIGD 332
            .|.||.|
pombe   324 TPGGIAD 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-A	NP_524583.1	recomb_RAD51	22..335	CDD:274048	154/319 (48%)
		HHH_5	30..77	CDD:291205	17/46 (37%)
		Rad51_DMC1_radA	99..331	CDD:238543	127/239 (53%)
dmc1	NP_594166.1	recomb_DMC1	18..331	CDD:131292	154/319 (48%)
		HHH_5	18..73	CDD:291205	18/54 (33%)
		Rad51_DMC1_radA	95..328	CDD:238543	126/238 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG62165
OrthoFinder	1	1.000	-	-		FOG0001571
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100483
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.720