Protein Alignment spn-A and Dmc1

DIOPT Version :9

• Sequence 1: NP_524583.1
• Gene: spn-A / 43577
• FlyBaseID: FBgn0003479
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_034189.1
• Gene: Dmc1 / 13404
• MGIID: 105393
• Length: 340
• Species: Mus musculus
• Alignment Length: 337
• Identity: 169/337 - (50%)
• Similarity: 221/337 - (65%)
• Gaps: 10/337 - (2%)

  Fly     8 QAQQEE---EEEEGPL--SVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGK 67
            |..|||   :::|..|  .:..|....|...|||.|:...:.|::.:...|::.|..:.||...|
Mouse     5 QVVQEESGFQDDEESLFQDIDLLQKHGINMADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAK 69

  Fly    68 VEQIITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQ 132
            ||:|...||||:..|||:|..:.:.|..|..::|||:|.|||||||||:.:|||.|||||.||||
Mouse    70 VEKIKEAANKLIEPGFLTAFQYSERRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQ 134

  Fly   133 LCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQ 197
            |.|||.||.|||.:.....||.::|||||||||:||..||.|:.::...|||||.:.||:.|:.|
Mouse   135 LSHTLCVTAQLPGTGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHEAVLDNVLYARAYTSEHQ 199

  Fly   198 TKLIQMAAGMLFESR--YALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAV 260
            .:|:...|....|..  :.|||:||.|||:|.|:.||||||.||..|...|..||::::|:.|||
Mouse   200 MELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAV 264

  Fly   261 VITNQVTASLDGAPGMF--DAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESEAMF 323
            .:|||:||. .||...|  |.||||||||:||:||||:.||||:||.||.||||||.:||:||.|
Mouse   265 FVTNQMTAD-PGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATF 328

  Fly   324 AILPDGIGDARE 335
            ||...|||||:|
Mouse   329 AITAGGIGDAKE 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-A	NP_524583.1	recomb_RAD51	22..335	CDD:274048	162/316 (51%)
		HHH_5	30..77	CDD:291205	15/46 (33%)
		Rad51_DMC1_radA	99..331	CDD:238543	133/235 (57%)
Dmc1	NP_034189.1	recomb_DMC1	24..338	CDD:131292	160/314 (51%)
		HHH_5	25..79	CDD:291205	16/53 (30%)
		Rad51_DMC1_radA	101..336	CDD:238543	133/235 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG62165
OrthoDB	1	1.010	-	-		D357659at33208
OrthoFinder	1	1.000	-	-		FOG0001571
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100483
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.730