Protein Alignment spn-A and Rad51c

DIOPT Version :9

• Sequence 1: NP_524583.1
• Gene: spn-A / 43577
• FlyBaseID: FBgn0003479
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: XP_036012127.1
• Gene: Rad51c / 114714
• MGIID: 2150020
• Length: 409
• Species: Mus musculus
• Alignment Length: 301
• Identity: 72/301 - (23%)
• Similarity: 119/301 - (39%)
• Gaps: 86/301 - (28%)

  Fly    32 AKDIKLLQQASLHTVE----------------SVAN--ATKKQLMAIPGLGGGKVEQIITEANKL 78
            :|::.:.::.:|.|::                ||||  .|..:|:          ||..|:
Mouse   153 SKEVGISKEEALETLQILRRECLTNKPRCAGTSVANEKCTALELL----------EQEHTQ---- 203

  Fly    79 VPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQL 143
               ||               :.|....||.:|||||.....||:.|....||||||..|||..|:
Mouse   204 ---GF---------------IITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQI 250

  Fly   144 PISQKGGEGKCMYIDTENTFRPERLAAIA----QRYKL-----NESE------------VLDNVA 187
            |....|..|:.::||||.:|..:|:.::|    |...|     .|.|            :|.::.
Mouse   251 PECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENILSHIY 315

  Fly   188 FTRAHNSDQQTKLIQMAAGMLFE-SRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQR 251
            :.|.|:..:....:.:....|.: .:..|:|:|.....:|.|.   .:|:.|...|....:.:..
Mouse   316 YFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDL---EDLSLRTRLLNGLAQQMIS 377

  Fly   252 LADEFGVAVVITNQVTASLDGAPGMFDAKKPIGGHIMAHSS 292
            ||:...:|:....|||.    ..|::|.       |..|:|
Mouse   378 LANNHRLAICNIVQVTK----PEGVYDT-------ISDHTS 407

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-A	NP_524583.1	recomb_RAD51	22..335	CDD:274048	72/301 (24%)
		HHH_5	30..77	CDD:291205	12/62 (19%)
		Rad51_DMC1_radA	99..331	CDD:238543	58/216 (27%)
Rad51c	XP_036012127.1	radA	127..409	CDD:235273	72/301 (24%)
		Rad51C	224..>393	CDD:410900	43/171 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810