DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jasper and psip1a

DIOPT Version :10

Sequence 1:NP_651768.1 Gene:Jasper / 43576 FlyBaseID:FBgn0039743 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_009289823.2 Gene:psip1a / 553760 ZFINID:ZDB-GENE-050522-104 Length:417 Species:Danio rerio


Alignment Length:436 Identity:97/436 - (22%)
Similarity:162/436 - (37%) Gaps:129/436 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AASYSIGDLVFAKVKGYPPWPAKITK------SNNNKKYNVYFYGTGETANIKLEDLFPYASNKE 65
            |..:..|||:|||:||||.|||:|.:      ..:|.|:.::|:||.|||.:..:|:|||.:||:
Zfish     2 AQDFKAGDLIFAKMKGYPHWPARIDEIPDGAVKPSNIKFPIFFFGTHETAFLGPKDIFPYLTNKD 66

  Fly    66 RFATEKIMKRAKFIEAIDQIESALRGEDSAPIDLLDGAEPVAPPTTGDGVKTEEPKPEPGPEPAT 130
            ::.  |..||..|.|.:.:||:                               .||         
Zfish    67 KYG--KPNKRKGFNEGLWEIEN-------------------------------NPK--------- 89

  Fly   131 AAPVAAAAEKPKKSGTRKTKAPPRHVDGDSE---AGAELAPPPAKRRVPTEGLATAAAIPAAPAA 192
               |.....|.||.|....|....:.:||.|   ..|::|        .:|||.....|......
Zfish    90 ---VELNGHKVKKVGEVSIKDLSSNEEGDDEKRTKSAQIA--------HSEGLEDEVDIEKEDGG 143

  Fly   193 ATPTSSKKSVK----KSKPTAAVTPIQKRSR-------PVNNIRNEMLMVYMPTAKCLGIVINYK 246
            ....|.::.||    ..|.:..||...||.|       ..::..|.     .|||...|:     
Zfish   144 DMDVSDQRLVKDEDLSQKDSTNVTAKAKRGRKRKSDAEQDSDTENS-----SPTAGGSGL----- 198

  Fly   247 KPESFESAAAEEAWME-NARKEALE--LKLKLESGQINPESMPDRIVVE---PTRSEIPKQEALR 305
               .|.|.......:: ..||...|  :.|:.::.:..|.|..|....|   ..|.|:..:..|:
Zfish   199 ---DFLSTGTSIMLLKRRGRKSKTEKSIILQQQASKELPRSGKDGKRDERKGDKRKEVSAESTLQ 260

  Fly   306 FIEELIEHEDALFMERDFIQLSQQLRECLGLRRANVGKCLEILEQFKEVEFTKLMLLRNPECVDI 370
                               :|..:::..|.:...:|.||:..|::...:..|...|.|:.|.:..
Zfish   261 -------------------KLHGEIKTSLKIGNLDVRKCVHALDELSSLHVTTQHLQRHSELIAT 306

  Fly   371 MRRLRRYVGNLELWKMDLSDEVEFKERAQTIRKVSSGIYDGFKSLF 416
            ::::.|:                  :.:|.:...:..:|:.|||:|
Zfish   307 LKKICRF------------------KSSQDVMDKAIMLYNKFKSMF 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JasperNP_651768.1 PWWP_HRP 10..86 CDD:438959 33/81 (41%)
LEDGF 320..440 CDD:463284 17/97 (18%)
psip1aXP_009289823.2 None

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