DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jasper and Glyr1

DIOPT Version :10

Sequence 1:NP_651768.1 Gene:Jasper / 43576 FlyBaseID:FBgn0039743 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001007801.1 Gene:Glyr1 / 360477 RGDID:1309459 Length:552 Species:Rattus norvegicus


Alignment Length:230 Identity:64/230 - (27%)
Similarity:96/230 - (41%) Gaps:45/230 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AAASYSIGDLVFAKVKGYPPWPAKIT-------KSNNNKKYNVYFYGTGETANIKLEDLFPYASN 63
            ||.|..:||||:.|:..|||||.||.       |....|.:.|.|:||.:.|.||:|.|.||.::
  Rat     2 AAVSLRLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAH 66

  Fly    64 KERFATEKIMKRAKFIEAIDQIESALRGEDSAPIDLLDGAEPVAPPTTGD-----GVKTEEPKPE 123
            ||...  ||.|..:|.:|:|.:|..||        ...|.:..:..|:.|     ....|..:|.
  Rat    67 KEEMI--KINKGKRFQQAVDAVEEFLR--------RAKGKDQTSSHTSADDKNRRNSSEERSRPN 121

  Fly   124 PGPEPATAAPVAAAAEKPKKSGTRKTKAPPRHVDGDSEAGAEL-------------APPPAKRRV 175
            .|.|....:......:|....|.:      |...|.::.|::.             .||..::.:
  Rat   122 SGDEKRKLSLSEGKVKKNMGEGKK------RVTSGSADRGSKCLKRAQEQSPRKRGRPPKDEKDL 180

  Fly   176 PTEGLATAAAIPAAPAAA---TPTSSKKSVKKSKP 207
            .....:|...:.|.|.||   .||:| :.||.:.|
  Rat   181 TIPESSTVKGMMAGPMAAFKWQPTAS-EPVKDADP 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JasperNP_651768.1 PWWP_HRP 10..86 CDD:438959 33/82 (40%)
LEDGF 320..440 CDD:463284
Glyr1NP_001007801.1 PWWP_GLYR1 6..90 CDD:438961 34/85 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..187 15/109 (14%)
Rossmann-fold NAD(P)(+)-binding proteins <209..>301 CDD:473865 3/6 (50%)
Interaction with histone H3. /evidence=ECO:0000250|UniProtKB:Q49A26 213..216 1/2 (50%)
Interaction with KDM1B. /evidence=ECO:0000250|UniProtKB:Q49A26 215..224 64/230 (28%)
Dehydrogenase domain. /evidence=ECO:0000250|UniProtKB:Q49A26 260..552
MmsB 267..550 CDD:441687
Blue background indicates that the domain is not in the aligned region.

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