DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jasper and Hdgfl1

DIOPT Version :10

Sequence 1:NP_651768.1 Gene:Jasper / 43576 FlyBaseID:FBgn0039743 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_032258.2 Gene:Hdgfl1 / 15192 MGIID:1194493 Length:283 Species:Mus musculus


Alignment Length:326 Identity:92/326 - (28%)
Similarity:124/326 - (38%) Gaps:91/326 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASYSIGDLVFAKVKGYPPWPAKITKSNNNKKYNVYFYGTGETANIKLEDLFPYASNKERFATEKI 72
            :.|..|||||||:|||..|||:|.......:|.|:|:||.|||.:....||||..:||:|.  |.
Mouse     7 SKYKTGDLVFAKLKGYAHWPARIEHVAEANRYQVFFFGTHETALLGPRHLFPYEESKEKFG--KP 69

  Fly    73 MKRAKFIEAIDQIE--------SALRGEDSAPI--------------DLLDGAEPVAPPTTGDGV 115
            .||..|.|.:.:||        |:|..|:....              :|:...||...|......
Mouse    70 NKRRGFSEGLWEIEHDPMVEASSSLCSEEDQSYTEDPGLAEEPELGQELVQELEPEFMPELEAEP 134

  Fly   116 KTEEPKPEPGPEPATAAPVAAAAEKPKKSGTRKTKAPPRHVDGDSEA-GAELAPPPAKRRVPTEG 179
            :..|.:.|..|||..|..:..|.|:|     ..|||.|    ||.:| ..:...|..:.....|.
Mouse   135 EMPETECEQEPEPQPAYDLLDAVEEP-----GLTKAEP----GDQQAEHVQEKHPEVEAEAEAEA 190

  Fly   180 LATAAAIPAAPA-AATPTSSKKSVKKSKPTAAVTPIQKRSRPVNNIRNEMLMVYMPTAKCLGIVI 243
            .|.|.|...|.| ...|.|.|:|.:..:|...:    ||.|..                      
Mouse   191 EAEAEAEAEAKAEVEEPGSLKRSAEDEEPHCPL----KRPREA---------------------- 229

  Fly   244 NYKKPESFESAAAEEAWMENARKEALELKLKLESGQINPESMPDRIVVEPTRSEIPKQEALRFIE 308
               .|.:.|...|||       :||              |:.|  .|.||.::    ||.|..:|
Mouse   230 ---APGALEMEPAEE-------REA--------------EACP--FVEEPDQA----QEQLPPLE 264

  Fly   309 E 309
            |
Mouse   265 E 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JasperNP_651768.1 PWWP_HRP 10..86 CDD:438959 35/75 (47%)
LEDGF 320..440 CDD:463284
Hdgfl1NP_032258.2 PWWP_HRP 9..85 CDD:438959 37/77 (48%)
PRK12323 <78..>154 CDD:481241 15/75 (20%)
Blue background indicates that the domain is not in the aligned region.

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