DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jasper and psip1

DIOPT Version :10

Sequence 1:NP_651768.1 Gene:Jasper / 43576 FlyBaseID:FBgn0039743 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_012811659.1 Gene:psip1 / 100145476 XenbaseID:XB-GENE-1007137 Length:589 Species:Xenopus tropicalis


Alignment Length:528 Identity:111/528 - (21%)
Similarity:198/528 - (37%) Gaps:174/528 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GDLVFAKVKGYPPWPAKI-------TKSNNNKKYNVYFYGTGETANIKLEDLFPYASNKERFATE 70
            |||:|||:||||.|||::       .|...| |..::|:||.|||.:..:|:|||..|||::|  
 Frog     8 GDLIFAKMKGYPHWPARVDELPDGAVKPPTN-KMPIFFFGTHETAFLGPKDIFPYDENKEKYA-- 69

  Fly    71 KIMKRAKFIEAIDQIE------------------SALRGEDSAPI--DLLDGAEPVA-------- 107
            |..||..|.|.:.:||                  :|||....|.:  ||.:..|.|.        
 Frog    70 KPNKRKGFNEGLWEIENNPKVKFSTPQNILAITNAALREAAEAQMQEDLEENEEKVTKRRKSTTS 134

  Fly   108 ------PPTTGDGVKTEEPKPEPGPEPAT------------------------------------ 130
                  ..::..|:::.|.......|.|:                                    
 Frog   135 KILGKHSDSSSSGLESPEKDMNATKEDASISDQLGSEDAGIIKDSPVVVKGRRGRKRKVDILAES 199

  Fly   131 -----AAPVAAAAEKPKKSGTRKTKAPPRHVDGDSEAGA----ELAPPPAKRRVPTEGLATAAAI 186
                 ||||:...:.||:....||: |.|:....:.|||    .||....|...| .|.......
 Frog   200 AQEIAAAPVSPPVQSPKRGRPGKTR-PGRNEPWKTFAGATSWHSLATGEVKVPKP-RGRPRLIKP 262

  Fly   187 PAAPAAATPTSSKKSVKKSKPTAAVTPIQKRSRPVNNIRNEMLMVYMPTAKCLGIVINYKKPESF 251
            |.:|.....:...:|.|||       |.:|..:.....::|:|                 |.|  
 Frog   263 PPSPERGITSEEDQSKKKS-------PERKPKKQTLQKKDEVL-----------------KDE-- 301

  Fly   252 ESAAAEEAWMENARKEALELKLKLESGQINP-ESMPDRIVVEPTR-------SEIPKQEALRFIE 308
            |....:|...:.||.|| |.|.|:.:...:| :|..|....|..:       |::.::.:|:..:
 Frog   302 EETPRKETDKKEARVEA-ETKKKVAAKTDSPAQSDSDDDEQEDGKKGKAGKLSQVAQKRSLKAQQ 365

  Fly   309 E------LIEHEDALFME---RDFI---------------------QLSQQLRECLGLRRANVGK 343
            |      ..:.|:.:.||   :|.:                     ::..:::..|.:...:|.:
 Frog   366 EKDIPDKKRKQEETVDMESQSKDEVKKIDVKKLDKKKETSTDARLQRIHAEIKSSLKIDHLDVNR 430

  Fly   344 CLEILEQFKEVEFTKLMLLRNPECVDIMRRLRRYVGNLELWKMDLSDEVEFKERAQTIRKVSSGI 408
            |:..|::...::.:.....::.:.:..::::||:                  :.:|.|...::.:
 Frog   431 CISALDELASLQVSMQQAQKHTDMITTLKKIRRF------------------KASQVIMDKATML 477

  Fly   409 YDGFKSLF 416
            |:.||::|
 Frog   478 YNKFKNMF 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JasperNP_651768.1 PWWP_HRP 10..86 CDD:438959 35/79 (44%)
LEDGF 320..440 CDD:463284 14/121 (12%)
psip1XP_012811659.1 PWWP_PSIP 5..92 CDD:438979 37/86 (43%)
PTZ00121 <267..572 CDD:173412 42/264 (16%)
LEDGF 407..508 CDD:463284 12/97 (12%)

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