DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7943 and GC1

DIOPT Version :10

Sequence 1:NP_651766.1 Gene:CG7943 / 43574 FlyBaseID:FBgn0039741 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster


Alignment Length:202 Identity:44/202 - (21%)
Similarity:80/202 - (39%) Gaps:55/202 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 EGLGFLYRG------MLPPLAQKTISLSIMFGVFDGTRRYLVEDYRLNDY--------------G 142
            ||...:|||      ::.|  :|.|.|:                  .|||              .
  Fly    76 EGYFGMYRGSGVNILLITP--EKAIKLT------------------ANDYFRHKLTTKDGKLPLT 120

  Fly   143 AKVLAAVVAGSAESIL-LPFERVQTLLADS-----------KFHQHFSNTQNAFRYVVSHHGYRE 195
            ::::|..:||:.:.|: .|.|.::..:.|:           |..:..|.||.|.: ::...|...
  Fly   121 SQMVAGGLAGAFQIIVTTPMELLKIQMQDAGRVAAAAKLAGKTVEKVSATQLASQ-LIKDKGIFG 184

  Fly   196 LYRGLEPVFWRNGLSNALFFVLREEASVRLPKRKSVSTRTV--QEFIAGAVIGASISTIFYPLNV 258
            ||:|:.....|:...:.::|.|....:...|:|...|...|  ..|:||...|::.:....|.:|
  Fly   185 LYKGIGATGLRDVTFSIIYFPLFATLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDV 249

  Fly   259 IKVSLQS 265
            :|..||:
  Fly   250 VKTRLQA 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7943NP_651766.1 Mito_carr 54..136 CDD:395101 9/43 (21%)
Mito_carr 141..229 CDD:395101 21/113 (19%)
Mito_carr 235..322 CDD:395101 10/33 (30%)
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 44/202 (22%)

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