DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7943 and CG5254

DIOPT Version :10

Sequence 1:NP_651766.1 Gene:CG7943 / 43574 FlyBaseID:FBgn0039741 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster


Alignment Length:294 Identity:68/294 - (23%)
Similarity:122/294 - (41%) Gaps:58/294 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 HGSVFSKRFFGSFQWEEFACGCGAAFVNIAVTYPIYKMIFRQMLHGVPITSA------------- 91
            |....:||  .:||   ...|..|.|:.:.:..|:..:..|..:...|..:|             
  Fly     6 HDISHAKR--AAFQ---VLAGGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVHYNGVFD 65

  Fly    92 -FAQL-RHEGLGFLYRGMLPPLAQKTISLSIMFGVFDGTRRYLVEDYRLNDYGAKV-------LA 147
             ||:: ||||:...::|::||:..:|...:|.|.||:.|:       .|..:|:..       ||
  Fly    66 CFAKMYRHEGISSYWKGIMPPILAETPKRAIKFLVFEQTK-------PLFQFGSPTPTPLTFSLA 123

  Fly   148 AVVAGSAESILL-PFERVQTL-LADSKFHQHFSNTQNAFRYVVSHH--GYRELYRGLEPVFWRNG 208
            .:.||:.|:|.: |||.|:.. .||.:  :...:|....:.::...  |:..|.:|:.....|||
  Fly   124 GLTAGTLEAIAVNPFEVVKVAQQADRQ--KKMLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNG 186

  Fly   209 LSNALFFVLREEASVRLPKRKSVSTRTVQEFIAGAVIGASISTIFYPLNVIKVSLQ--------- 264
            :.|.::|.........:|:.|......:::...|.:.|.....:..|.:|.|..:|         
  Fly   187 VFNMVYFGFYHSVKNVVPEYKESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQGPQPVPGQI 251

  Fly   265 ------SEMG--QRSEGSWQACKRIYVERDRRIG 290
                  |.||  .|.|| ::|..:..|.:..|:|
  Fly   252 KYRGTLSSMGIVYREEG-FRALYKGLVPKIMRLG 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7943NP_651766.1 Mito_carr 54..136 CDD:395101 22/96 (23%)
Mito_carr 141..229 CDD:395101 23/98 (23%)
Mito_carr 235..322 CDD:395101 16/73 (22%)
CG5254NP_569856.2 Mito_carr 18..112 CDD:395101 23/100 (23%)
Mito_carr 122..207 CDD:395101 22/86 (26%)
Mito_carr 209..305 CDD:395101 16/77 (21%)

Return to query results.
Submit another query.