DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7943 and Slc25a20

DIOPT Version :10

Sequence 1:NP_651766.1 Gene:CG7943 / 43574 FlyBaseID:FBgn0039741 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_446417.2 Gene:Slc25a20 / 117035 RGDID:621443 Length:301 Species:Rattus norvegicus


Alignment Length:244 Identity:59/244 - (24%)
Similarity:104/244 - (42%) Gaps:26/244 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LRHEGLGFLYRGMLPPLAQKTISLSIMFGVFDGTRRYLVEDYRLND--YGAKVLAAVVAG-SAES 156
            |..||:..|||||..|:...|...::.|..| |..:.|.:....::  |.....|.:::| ....
  Rat    63 LFREGITGLYRGMAAPIIGVTPMFAVCFFGF-GLGKRLQQKS
PEDELTYPQLFTAGMLSGVFTTG 126

  Fly   157 ILLPFERVQTLL--ADSKFHQHFSNTQNAFRYVVSHHGYRELYRGLEPVFWRNGLSNALFFVLRE 219
            |:.|.||::.||  ..|.....:|.|.:..:.:....|.|..|:|......|:..::.::|:..|
  Rat   127 IMTPGERIKCLLQIQASSGKNKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYFMTYE 191

  Fly   220 -EASVRLPKRKSVSTRTV-QEFIAGAVIGASISTIFYPLNVIKVSLQ-SEMGQRSEGSWQACKRI 281
             ..::..|:.|||...:| :..:||...|.....:..|.:|:|...| :..|:...|.....:.:
  Rat   192 WLKNLFT
PQGKSVHDLSVPRVLVAGGFAGIFNWVVAIPPDVLKSRFQTAPPGKYPNGFRDVLREL 256

  Fly   282 YVERDRRIGNFYRGCPFNTG--RSF-----------ISWGIMNTAYENL 317
            .  |:..:.:.|:|  ||..  |:|           |:..|:|....||
  Rat   257 I--REEGVTSLYKG--FNAVMIRAFPANAACFLGFEIAMKILNWIAPNL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7943NP_651766.1 Mito_carr 54..136 CDD:395101 14/40 (35%)
Mito_carr 141..229 CDD:395101 20/91 (22%)
Mito_carr 235..322 CDD:395101 22/98 (22%)
Slc25a20NP_446417.2 Mito_carr 6..103 CDD:395101 14/40 (35%)
Solcar 1 8..99 13/36 (36%)
Mito_carr 106..198 CDD:395101 19/91 (21%)
Solcar 2 108..196 19/87 (22%)
Mito_carr 206..294 CDD:395101 18/91 (20%)
Solcar 3 207..293 18/89 (20%)

Return to query results.
Submit another query.