DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sry-delta and ZNF160

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001096073.1 Gene:ZNF160 / 90338 HGNCID:12948 Length:818 Species:Homo sapiens


Alignment Length:266 Identity:69/266 - (25%)
Similarity:103/266 - (38%) Gaps:47/266 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 DRPTKKRVKQECTTCGKVYNSWYQLQKH------------------ISEE---------HSKQPN 222
            ::|.|      |..||||:....||.:|                  .|:.         |:.:..
Human   562 EKPYK------CNECGKVFAQTSQLARHWRVHTGEKPYKCNDCGRAFSDRSSLTFHQAIHTGEKP 620

  Fly   223 HICPICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLR 287
            :.|..||.:.|...||..|..:|.|:...:|..|.|:||...|...|..:|..:|.|:|.:||..
Human   621 YKCHECGKVFRHNSYLATHRRIHTGEKPYKCNECGKAFSMHSNLTTHKVIHTGEKPYKCNQCGKV 685

  Fly   288 FSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYTL 352
            |:|::.|.||:..|..|: |..|:.|..:|..|.:...|..||...:| :.|:.|.|.||:...|
Human   686 FTQNSHLANHQRTHTGEK-PYRCNECGKAFSVRSSLTTHQAIHTGKKP-YKCNECGKVFTQNAHL 748

  Fly   353 KMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVTVIMSDNDENSGFCLICNTNFENK 417
            ..|.:.|.|:..|...|...|...:.....|:.:...|....            |..|...|...
Human   749 ANHRRIHTGEKPYRCTECGKAFRVRSSLTTHMAIHTGEKRYK------------CNECGKVFRQS 801

  Fly   418 KELEHH 423
            ..|..|
Human   802 SNLASH 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 50/181 (28%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
C2H2 Zn finger 310..327 CDD:275370 4/16 (25%)
zf-C2H2 337..359 CDD:278523 7/21 (33%)
C2H2 Zn finger 339..359 CDD:275368 7/19 (37%)
ZNF160NP_001096073.1 KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
zf-C2H2 257..279 CDD:278523
C2H2 Zn finger 259..279 CDD:275368
zf-H2C2_2 271..295 CDD:290200
C2H2 Zn finger 287..307 CDD:275368
zf-H2C2_2 299..324 CDD:290200
C2H2 Zn finger 315..335 CDD:275368
zf-H2C2_2 327..350 CDD:290200
C2H2 Zn finger 343..363 CDD:275368
zf-H2C2_2 355..380 CDD:290200
COG5048 367..810 CDD:227381 69/266 (26%)
C2H2 Zn finger 371..391 CDD:275368
C2H2 Zn finger 399..419 CDD:275368
zf-H2C2_2 411..436 CDD:290200
C2H2 Zn finger 427..447 CDD:275368
zf-H2C2_2 439..463 CDD:290200
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 483..503 CDD:275368
zf-H2C2_2 496..519 CDD:290200
C2H2 Zn finger 511..531 CDD:275368
zf-H2C2_2 523..548 CDD:290200
C2H2 Zn finger 539..559 CDD:275368
zf-H2C2_2 551..576 CDD:290200 7/19 (37%)
C2H2 Zn finger 567..587 CDD:275368 8/19 (42%)
C2H2 Zn finger 595..615 CDD:275368 1/19 (5%)
zf-H2C2_2 607..632 CDD:290200 4/24 (17%)
C2H2 Zn finger 623..643 CDD:275368 7/19 (37%)
zf-H2C2_2 635..659 CDD:290200 8/23 (35%)
C2H2 Zn finger 651..671 CDD:275368 7/19 (37%)
zf-H2C2_2 663..688 CDD:290200 9/24 (38%)
C2H2 Zn finger 679..699 CDD:275368 8/19 (42%)
zf-H2C2_2 691..715 CDD:290200 8/24 (33%)
C2H2 Zn finger 707..727 CDD:275368 5/19 (26%)
zf-H2C2_2 719..744 CDD:290200 8/25 (32%)
C2H2 Zn finger 735..755 CDD:275368 7/19 (37%)
zf-H2C2_2 747..770 CDD:290200 6/22 (27%)
C2H2 Zn finger 763..783 CDD:275368 3/19 (16%)
zf-H2C2_2 775..800 CDD:290200 5/36 (14%)
C2H2 Zn finger 791..811 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142346
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.