DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and AT2G45120

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_182037.1 Gene:AT2G45120 / 819119 AraportID:AT2G45120 Length:314 Species:Arabidopsis thaliana


Alignment Length:326 Identity:68/326 - (20%)
Similarity:113/326 - (34%) Gaps:100/326 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 EEV-EIPQSDVETDADAEADALFVELVKDQEESDTEIKREFVDEEEEEDDDDDDEFICEDVDVGD 172
            ||| |.|....:.|.|.|:||     .....|.|.: |...:|:|.|.|..:||     ||:   
plant    43 EEVEERPSQLCDDDDDTESDA-----SSSSGEFDNQ-KMNRLDDELEFDFAEDD-----DVE--- 93

  Fly   173 SEALYGKSSDGEDRPTKKRVKQECTTCGKVYNSWYQLQKHISEEHSK---QPNHICPICGVIRRD 234
                 .::......||::|.|:    ..|:.:..:..:|..:.:.|:   :|.|           
plant    94 -----SETESSRINPTRRRSKR----TRKLGSFDFDFEKLTTSQPSELVAEPEH----------- 138

  Fly   235 EEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRL 299
                  |.:..:..||:...:|....||            ||.|.| :|...|..:|      ..
plant   139 ------HSSASDTTTEEDLAFCLIMLSR------------DKWKQQ-KKKKQRVEED------ET 178

  Fly   300 RHEAEE-------NPIICSICNVSFKSRKTFNHHTLIHKEN--------------------RPRH 337
            .|::|:       ....|..|...|||.:....|...||:|                    :..|
plant   179 DHDSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKKVH 243

  Fly   338 YCSVCPKSFTERYTLKMHMKTHEGDVVYG----------VREEAPADEQQVVEELHVDVDESEAA 392
            .|.:|.:.||....|..|.::|..::..|          :.||....::.:...|....:|.|.:
plant   244 ECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEEDETS 308

  Fly   393 V 393
            :
plant   309 L 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 35/184 (19%)
C2H2 Zn finger 225..245 CDD:275368 1/19 (5%)
C2H2 Zn finger 253..273 CDD:275368 3/19 (16%)
C2H2 Zn finger 281..301 CDD:275368 3/19 (16%)
C2H2 Zn finger 310..327 CDD:275370 5/16 (31%)
zf-C2H2 337..359 CDD:278523 7/21 (33%)
C2H2 Zn finger 339..359 CDD:275368 6/19 (32%)
AT2G45120NP_182037.1 zf-C2H2_6 3..27 CDD:404748
zf-C2H2_6 193..218 CDD:404748 7/24 (29%)
C2H2 Zn finger 196..216 CDD:275368 6/19 (32%)
zf-C2H2_6 242..265 CDD:404748 7/22 (32%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I2552
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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