DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and ZNF142

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001353219.1 Gene:ZNF142 / 7701 HGNCID:12927 Length:1887 Species:Homo sapiens


Alignment Length:305 Identity:61/305 - (20%)
Similarity:99/305 - (32%) Gaps:90/305 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 EDRPTKKRVKQECTTCGKVYNSWYQLQKHISEEHSK---------------QPNHICPICGVIRR 233
            ::...::.....|..|.........|.||..|:|.:               ||...||.|....|
Human  1570 DEHRRQQHFSHRCQLCDFAARERVGLVKHYLEQHEETSAAVAASDGDGDAGQPPLHCPFCDFTCR 1634

  Fly   234 DEEYLELHM----------------------------NLHEGKTEKQCRYCPKSFSRPVNTLRHM 270
            .:..|:.|:                            .:|.|:....|..||.:.:.|.....||
Human  1635 HQLVLDHHVKGHGGTRLYKCTDCAYSTKNRQKITWHSRIHTGEKPYHCHLCPYACADPSRLKYHM 1699

  Fly   271 RMHWDKKKYQCEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIHKENRP 335
            |:|.:::||.|.:||.:....|.|..|..:|...: |..|..|...........    :|:|.|.
Human  1700 RIHKEERKYLCPECGYKCKWVNQLKYHMTKHTGLK-PYQCPECEYCTNRADALR----VHQETRH 1759

  Fly   336 RH----YCSVCPKSFTERYTLKMHMKTHEGDVVY-------------GVREEAPADEQQVVEELH 383
            |.    .|..|.|:|..|:.|:.|::.|.....|             |:|..|            
Human  1760 REARAFMCEQCGKAFKTRFLLRTHLRKHSEAKPYVCNVCHRAFRWAAGLRHHA------------ 1812

  Fly   384 VDVDESEAAVTVIMSDNDENSGFCLICNTNFENKKELEHHLQFDH 428
                         ::..|.:..||.:||...:.|.::..|::..|
Human  1813 -------------LTHTDRHPFFCRLCNYKAKQKFQVVKHVRRHH 1844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 46/201 (23%)
C2H2 Zn finger 225..245 CDD:275368 6/47 (13%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..327 CDD:275370 2/16 (13%)
zf-C2H2 337..359 CDD:278523 7/25 (28%)
C2H2 Zn finger 339..359 CDD:275368 7/19 (37%)
ZNF142NP_001353219.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
C2H2 Zn finger 365..385 CDD:275368
C2H2 Zn finger 393..413 CDD:275368
C2H2 Zn finger 421..438 CDD:275368
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 545..566 CDD:275368
C2H2 Zn finger 574..595 CDD:275368
zf-H2C2_5 601..625 CDD:404746
C2H2 Zn finger 603..623 CDD:275368
C2H2 Zn finger 631..651 CDD:275368
C2H2 Zn finger 659..679 CDD:275368
C2H2 Zn finger 687..707 CDD:275368
C2H2 Zn finger 714..731 CDD:275368
PHA03247 928..>1219 CDD:223021
C2H2 Zn finger 1306..1353 CDD:275368
C2H2 Zn finger 1373..1394 CDD:275368
C2H2 Zn finger 1402..1422 CDD:275368
C2H2 Zn finger 1430..1451 CDD:275368
C2H2 Zn finger 1626..1646 CDD:275368 6/19 (32%)
C2H2 Zn finger 1654..1674 CDD:275368 0/19 (0%)
C2H2 Zn finger 1682..1702 CDD:275368 7/19 (37%)
C2H2 Zn finger 1710..1730 CDD:275368 6/19 (32%)
zf-H2C2_2 1723..1747 CDD:404364 6/24 (25%)
C2H2 Zn finger 1738..1759 CDD:275368 4/24 (17%)
C2H2 Zn finger 1767..1787 CDD:275368 7/19 (37%)
C2H2 Zn finger 1795..1815 CDD:275368 3/44 (7%)
C2H2 Zn finger 1823..1843 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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