DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and znf1059

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001121721.2 Gene:znf1059 / 563440 ZFINID:ZDB-GENE-030131-8437 Length:390 Species:Danio rerio


Alignment Length:328 Identity:88/328 - (26%)
Similarity:141/328 - (42%) Gaps:38/328 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VPESGEDILVEEV-EIPQSDVETDADAEADALFVELVKDQEESDTEIKREFVDEEEEEDDDDDDE 162
            :.|..||:.:||. .:.|.|::...|     |.|...:.|:.::.| :::|   |::::..|:..
Zfish     4 IKEESEDVKIEETFSVKQEDLQEQTD-----LMVLKTETQQWNEME-EKQF---EKQQEITDEKP 59

  Fly   163 FICEDVDVGDSEALYGKSSDGEDRPTKKRVKQECTTCGKVYNSWYQLQKHISEEHSKQPNHICPI 227
            .:.|..           ||.|..|.:|......|..||..::..:.||.|: ..||.:..:.|..
Zfish    60 TLTEKT-----------SSHGRPRNSKSACNFTCRQCGNRFSRKHNLQVHM-RIHSGEKPYTCQQ 112

  Fly   228 CGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRF-SQD 291
            ||........|.:||.:|.|:....|..|.|||.:..|...|||.|..::.|:|::||.|| :..
Zfish   113 CGQCFCTSGNLVVHMRIHTGEKPYSCSQCGKSFKQISNLKVHMRTHTGERPYECQQCGQRFYTTG 177

  Fly   292 NLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYTLKMHM 356
            |...:.|:.......|  |..|..||........|..||...|| :.|..|.|||.:...|:.||
Zfish   178 NFAQHMRIHTGVGLYP--CLQCGKSFHQSANLVAHMRIHTGERP-YSCIQCGKSFKQNSNLEAHM 239

  Fly   357 KTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVTVIMSDNDENSGFCLICNTNFENKKELE 421
            :.|.|..::...:...:..|:...|:|:.|...|...|            |..|:.:|..|..|:
Zfish   240 RIHTGGRIFTCTQCGKSFAQKQDLEIHIRVHTGEKPYT------------CTECSKSFRYKSTLK 292

  Fly   422 HHL 424
            ||:
Zfish   293 HHM 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 49/155 (32%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..273 CDD:275368 9/19 (47%)
C2H2 Zn finger 281..301 CDD:275368 7/20 (35%)
C2H2 Zn finger 310..327 CDD:275370 4/16 (25%)
zf-C2H2 337..359 CDD:278523 8/21 (38%)
C2H2 Zn finger 339..359 CDD:275368 8/19 (42%)
znf1059NP_001121721.2 COG5048 <58..322 CDD:227381 73/265 (28%)
C2H2 Zn finger 82..102 CDD:275368 6/20 (30%)
zf-H2C2_2 94..117 CDD:290200 8/23 (35%)
C2H2 Zn finger 110..130 CDD:275368 6/19 (32%)
zf-H2C2_2 122..147 CDD:290200 10/24 (42%)
C2H2 Zn finger 138..158 CDD:275368 9/19 (47%)
zf-H2C2_2 150..175 CDD:290200 11/24 (46%)
C2H2 Zn finger 166..186 CDD:275368 7/19 (37%)
zf-H2C2_2 206..231 CDD:290200 10/25 (40%)
C2H2 Zn finger 222..242 CDD:275368 8/19 (42%)
zf-H2C2_2 234..259 CDD:290200 5/24 (21%)
C2H2 Zn finger 250..270 CDD:275368 3/19 (16%)
zf-H2C2_2 262..287 CDD:290200 8/36 (22%)
C2H2 Zn finger 278..298 CDD:275368 7/18 (39%)
zf-H2C2_2 291..315 CDD:290200 3/5 (60%)
C2H2 Zn finger 306..326 CDD:275368
C2H2 Zn finger 334..354 CDD:275368
C2H2 Zn finger 362..382 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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