DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and znf711

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001352539.1 Gene:znf711 / 562505 ZFINID:ZDB-GENE-081107-49 Length:765 Species:Danio rerio


Alignment Length:625 Identity:118/625 - (18%)
Similarity:194/625 - (31%) Gaps:254/625 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ETLSAKVPSSQKTVSLVLTHLANCIQTQLDLK-PGARLCPRCFQELSDYDTIMVNLMTTQKRLTT 87
            :.:...||.......|:..|    ||:.||.. ..|.:.      ::|.||::.:..|.|..:|.
Zfish   107 DLIEETVPDQVFVAELMSPH----IQSPLDHNLVSAEVM------VTDADTVIDSHDTLQSDVTI 161

  Fly    88 QLKGALKSEFEVPESGEDIL------------VEEVEIP-QSDVETDADA------EADALFVEL 133
            :   |...|.:|..:.||.|            :|:..:. .:||..|.|.      .::.:.|.:
Zfish   162 K---ADDDEEDVKSTSEDYLMISLDEVGGKLDIEDTSLKISADVGQDDDGSKEDEFSSEVIKVYI 223

  Fly   134 VKDQEESDTEIKREFVDEEEE--------------------------EDDDDDDEFICE------ 166
            .|...:.|.||....|.||.:                          :|.:.:|:..|.      
Zfish   224 FKADGDEDVEIGSTEVVEESDFPGRHTVMESVGSGRLPREKMVYMAVKDANQEDDLNCSEMTDQV 288

  Fly   167 --DVDVGDSEA------------------------LYGKSSDGED----------------RPTK 189
              :|.||:.||                        .||.|.:.::                |..|
Zfish   289 YMEVIVGEEEAPAITEAQMEDSPVNKTIVPAAWATAYGSSLESKNGAATPYLQITDSISTSRALK 353

  Fly   190 KRVKQE-----------------------------CTTCGKVYNSWYQLQKHISE--EHSKQPNH 223
            :::|:.                             |..|||.:.|...|::|:..  :|..:..:
Zfish   354 QKIKKRRRGETRQCQTGMSFSVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMFKKKY 418

  Fly   224 ICPICG------------------VIRRDE--EYLELHMNLHEG------------KTEK--QCR 254
            .|..|.                  :|:.::  ||.|.....||.            |..|  :|:
Zfish   419 QCTDCEFTTNKKVSFHNHLESHKLIIKNEKIPEYTEYTRRYHEASPLSSNKLILRDKEPKLHKCK 483

  Fly   255 Y-----------------------------CPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFS- 289
            |                             |.|.|..|....:|||.|..:|.:.|:.|  .|| 
Zfish   484 YCEYETAEQGLLNRHLLAVHSKNFAHVCVECAKGFRHPSELKKHMRTHTGEKPFHCQHC--EFSC 546

  Fly   290 --QDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHT------------------------- 327
              |.||..:.:.:| ..:.|..|..|..:|...|....|.                         
Zfish   547 ADQSNLKTHIKSKH-GTDLPFKCGHCPQAFADDKELQRHAEIFQGHKTHQCPHCEHKSTNSSDLK 610

  Fly   328 ----LIHKENRPRHYCSVCPKSFTERYTLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDE 388
                .:|.::.| |.|.||.|.|.....||.|.:||:|:.|:..|              |.|...
Zfish   611 RHIISVHTKDFP-HKCDVCEKGFHRPSELKKHSETHKGNKVHQCR--------------HCDFKT 660

  Fly   389 SEAAVTV--IMSDNDENSGF-CLICNTNFENKKELEHHLQ 425
            .:.....  |:|.:.::..| |..|...|.::.||:.|::
Zfish   661 LDPFTLSRHILSVHTKDLPFKCKRCKRGFRHQNELKKHMK 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 51/251 (20%)
C2H2 Zn finger 225..245 CDD:275368 6/39 (15%)
C2H2 Zn finger 253..273 CDD:275368 9/48 (19%)
C2H2 Zn finger 281..301 CDD:275368 7/22 (32%)
C2H2 Zn finger 310..327 CDD:275370 4/16 (25%)
zf-C2H2 337..359 CDD:278523 9/21 (43%)
C2H2 Zn finger 339..359 CDD:275368 8/19 (42%)
znf711NP_001352539.1 Zfx_Zfy_act 64..368 CDD:309717 48/273 (18%)
COG5048 385..763 CDD:227381 70/334 (21%)
C2H2 Zn finger 389..409 CDD:275368 7/19 (37%)
C2H2 Zn finger 482..503 CDD:275368 2/20 (10%)
C2H2 Zn finger 511..531 CDD:275368 7/19 (37%)
C2H2 Zn finger 539..560 CDD:275368 7/22 (32%)
C2H2 Zn finger 568..584 CDD:275368 4/15 (27%)
C2H2 Zn finger 596..617 CDD:275368 0/20 (0%)
C2H2 Zn finger 625..645 CDD:275368 8/19 (42%)
C2H2 Zn finger 682..702 CDD:275368 6/19 (32%)
C2H2 Zn finger 710..731 CDD:275368
C2H2 Zn finger 739..759 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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