DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and zgc:171901

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_003200031.1 Gene:zgc:171901 / 556292 ZFINID:ZDB-GENE-080220-13 Length:381 Species:Danio rerio


Alignment Length:344 Identity:86/344 - (25%)
Similarity:139/344 - (40%) Gaps:76/344 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 QEESDTEIKREFVDEEEE---------EDDDDDDEFIC---EDVDVGDSEALYGKSSDGEDRPTK 189
            :|..|.||:..|..:.||         ||.::..:.:.   |:.|:.|.:.        ||:| :
Zfish     6 EESEDVEIEETFTVKHEETEEAFRVKHEDPEEQTDLMLLKEENQDLKDVQE--------EDQP-E 61

  Fly   190 KRVKQECTTCGKVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTEKQCR 254
            :::..:..|..|.|     |||.:.|.:|.    .|..||.....:..||:||.:|.|:....|:
Zfish    62 EQLNLKTRTTNKSY-----LQKSVPETNSS----TCQQCGKSFSGKRNLEVHMRIHTGEKPFTCQ 117

  Fly   255 YCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKS 319
            :|.|||::..|...||.:|..:|.|.|:.||.:|:|.....:|...|..|:: ..|::|..||..
Zfish   118 HCGKSFTQKGNLKSHMIIHSGEKPYACQICGKKFAQKRNRADHMRLHTGEKS-FTCNLCGKSFTQ 181

  Fly   320 RKTFNHHTLIHKENRPRHYCSVCPKSFTERYTLKMHMKTHEGDVVY---------------GVRE 369
            :.....|.:||...:| :.|..|..:||::..|:.|||.|.|:..:               |...
Zfish   182 KGNLKSHLIIHSGEKP-YSCQQCQSTFTQKVHLEQHMKVHSGEKPFTCDQCGKSFTLKDSLGSHM 245

  Fly   370 EAPADEQQVV-------------EELHVDVDESEAAVTV----------------IMSDNDENSG 405
            .|...|.|.:             ..:|:.|...|...|.                |.....||..
Zfish   246 RAHTGESQFICHQCGKSFNHKKSFNIHLRVHTGEEPYTCCWCGRSFRYKASLDVHIRVHTGENPH 310

  Fly   406 FCLICNTNFENKKELEHHL 424
            .|.:|..:|..|..|:.|:
Zfish   311 TCRLCGKSFTQKGSLKAHM 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 49/154 (32%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..327 CDD:275370 4/16 (25%)
zf-C2H2 337..359 CDD:278523 8/21 (38%)
C2H2 Zn finger 339..359 CDD:275368 8/19 (42%)
zgc:171901XP_003200031.1 COG5048 <38..272 CDD:227381 64/253 (25%)
C2H2 Zn finger 88..108 CDD:275368 7/19 (37%)
zf-H2C2_2 100..125 CDD:290200 11/24 (46%)
C2H2 Zn finger 116..136 CDD:275368 8/19 (42%)
zf-H2C2_2 128..153 CDD:290200 10/24 (42%)
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..192 CDD:275368 5/19 (26%)
C2H2 Zn finger 200..220 CDD:275368 8/19 (42%)
zf-H2C2_2 212..236 CDD:290200 6/23 (26%)
C2H2 Zn finger 228..248 CDD:275368 1/19 (5%)
C2H2 Zn finger 256..276 CDD:275368 1/19 (5%)
C2H2 Zn finger 284..304 CDD:275368 1/19 (5%)
zf-H2C2_2 296..321 CDD:290200 6/24 (25%)
C2H2 Zn finger 312..332 CDD:275368 6/18 (33%)
zf-H2C2_2 324..349 CDD:290200 2/6 (33%)
C2H2 Zn finger 340..360 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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