DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and si:dkey-262g12.9

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_021331485.1 Gene:si:dkey-262g12.9 / 555910 ZFINID:ZDB-GENE-161017-28 Length:380 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381
C2H2 Zn finger 225..245 CDD:275368
C2H2 Zn finger 253..273 CDD:275368
C2H2 Zn finger 281..301 CDD:275368
C2H2 Zn finger 310..327 CDD:275370
zf-C2H2 337..359 CDD:278523
C2H2 Zn finger 339..359 CDD:275368
si:dkey-262g12.9XP_021331485.1 COG5048 <75..263 CDD:227381
C2H2 Zn finger 83..103 CDD:275368
C2H2 Zn finger 111..131 CDD:275368
C2H2 Zn finger 139..159 CDD:275368
C2H2 Zn finger 167..187 CDD:275368
C2H2 Zn finger 195..215 CDD:275368
COG5048 216..>328 CDD:227381
C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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