DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and zgc:113294

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001013567.1 Gene:zgc:113294 / 541422 ZFINID:ZDB-GENE-050320-124 Length:332 Species:Danio rerio


Alignment Length:333 Identity:89/333 - (26%)
Similarity:145/333 - (43%) Gaps:36/333 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 EFEVPESGEDILVEEV-EIPQSDVETDADAEADALFVELVKDQEESDTEI---KREFVDEEEEED 156
            || :.|..|||.:||. .:...::|.         |:...:|.||...::   |.|..|:.|.|:
Zfish     2 EF-IKEESEDIKIEETFPVKHEEIEE---------FIIKYEDPEEQTEDLIPPKEEGQDQNEMEE 56

  Fly   157 DDDDDEFICEDVDVGDSEALYGKSSDGEDRPTKKRVKQECTTCGKVYNSWYQLQKHISEEHSKQP 221
            :|..:|: |:.....|||    :::...:...:|.....|..||:.:.....|.:|::..:.::|
Zfish    57 NDQYEEY-CDFTPEEDSE----QTNASSEETARKAKSNTCHQCGRSFTRKQYLIEHMTIHNGEKP 116

  Fly   222 NHICPICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGL 286
             :.|..||.....::.|::||..|..:....|..|.|||:|..|..:||.:|..:|.|.||.||.
Zfish   117 -YTCQQCGKSFTWKQNLKIHMRTHTDEKPYTCHQCGKSFARNQNLSKHMGVHTGEKPYTCECCGK 180

  Fly   287 RFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYT 351
            .|::...|..| :|....|.|..|..|..:|..::....|..||...: .|.|:.|.||||.:..
Zfish   181 CFTRQQNLTGH-MRVHTGEKPYTCQHCGQNFTWKQNLTGHMSIHTGGK-AHACNQCGKSFTRKQN 243

  Fly   352 LKMHMKTHEGDVVYGVREEAPA-DEQQVVEELHVDVDESEAAVTVIMSDNDENSGFCLICNTNFE 415
            |..|||.|.....:...:...: ..:|::.| |:.....|...|            |..|..:|.
Zfish   244 LVDHMKIHTEGKAHTCHQCGKSFTRKQILTE-HMRTHTGEKPYT------------CQQCGKSFA 295

  Fly   416 NKKELEHH 423
            .|..|:.|
Zfish   296 TKAYLKRH 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 49/154 (32%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..273 CDD:275368 9/19 (47%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..327 CDD:275370 3/16 (19%)
zf-C2H2 337..359 CDD:278523 11/21 (52%)
C2H2 Zn finger 339..359 CDD:275368 10/19 (53%)
zgc:113294NP_001013567.1 COG5048 <71..207 CDD:227381 40/141 (28%)
C2H2 Zn finger 91..111 CDD:275368 5/19 (26%)
zf-H2C2_2 103..127 CDD:290200 6/24 (25%)
C2H2 Zn finger 119..139 CDD:275368 6/19 (32%)
zf-H2C2_2 131..156 CDD:290200 9/24 (38%)
C2H2 Zn finger 147..167 CDD:275368 9/19 (47%)
zf-H2C2_2 159..184 CDD:290200 11/24 (46%)
C2H2 Zn finger 175..195 CDD:275368 8/20 (40%)
zf-H2C2_2 187..211 CDD:290200 7/24 (29%)
C2H2 Zn finger 203..223 CDD:275368 4/19 (21%)
C2H2 Zn finger 231..251 CDD:275368 10/19 (53%)
COG5048 259..>318 CDD:227381 11/58 (19%)
C2H2 Zn finger 259..279 CDD:275368 3/20 (15%)
zf-H2C2_2 272..296 CDD:290200 7/36 (19%)
C2H2 Zn finger 287..307 CDD:275368 6/17 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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