DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and im:7141269

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_002661922.1 Gene:im:7141269 / 492560 ZFINID:ZDB-GENE-041111-134 Length:368 Species:Danio rerio


Alignment Length:367 Identity:98/367 - (26%)
Similarity:155/367 - (42%) Gaps:72/367 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 LKSEFEVPESGEDI-LVEEVEIPQSDVETDADAEADALFVELVKDQEESDTEIKREFVDEEEEED 156
            :|.|| :.|..||: ::|.|.|...|.|..||         ||:.:||     .:|.::.||:..
Zfish     1 MKMEF-IKEESEDVKIIEMVTIKYEDPEEQAD---------LVEPKEE-----PQELIEMEEKPQ 50

  Fly   157 DDDDDEFICEDVDVGDSEALYGKSSDGEDRPTKKRVKQE------CTTCGKVYNSWYQLQKHISE 215
                    ||...|..:|..:.:::....|.:|...|.:      |..|||.:.....|:.|::.
Zfish    51 --------CETQHVSATEEPHTEATQTSTRTSKSPQKSKPSSLFICCQCGKSFTRKQSLEGHMNL 107

  Fly   216 EHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQ 280
            .:.::| :.|..||...|.:..|.:||.:|.|:....|:.|.||||.......|||.|..:|.|.
Zfish   108 HNGEKP-YSCQQCGKSFRQKPNLRVHMRVHTGEKPYTCKQCGKSFSLVQGFKIHMRSHTGEKPYV 171

  Fly   281 CEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIH--------------- 330
            |::||..|||.: .:|...|....|.|..|.:|...|..::..|.|.:||               
Zfish   172 CQQCGKGFSQIS-SFNSHTRIHTREKPYSCQLCGKDFSIKQHLNDHMIIHSAEKAFECQQCGKTF 235

  Fly   331 --KENRPRHY----------CSVCPKSFTERYTLKMHMKTHEGDVVYGVREEAPADEQQVVEELH 383
              |.:..:|.          |.:|..|||:.|:||.||:.|.|:..|..::......|....::|
Zfish   236 FLKRHLKKHIRVHSGEKNFTCQLCGNSFTQMYSLKRHMRIHSGEKPYSCQQCGKRFTQNNSLDIH 300

  Fly   384 VDVDESEAAVTVIMSDNDENSGFCLICNTNFENKKELEHHLQ 425
            |             ..:.|.|..|..|..:|..|.:|.:|::
Zfish   301 V-------------RTHTERSFTCQECGESFNLKSDLNNHVK 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 53/181 (29%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
C2H2 Zn finger 253..273 CDD:275368 9/19 (47%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..327 CDD:275370 4/16 (25%)
zf-C2H2 337..359 CDD:278523 11/31 (35%)
C2H2 Zn finger 339..359 CDD:275368 10/19 (53%)
im:7141269XP_002661922.1 COG5048 69..>362 CDD:227381 74/276 (27%)
C2H2 Zn finger 88..108 CDD:275368 6/19 (32%)
C2H2 Zn finger 116..136 CDD:275368 7/19 (37%)
C2H2 Zn finger 144..164 CDD:275368 9/19 (47%)
C2H2 Zn finger 172..192 CDD:275368 8/20 (40%)
C2H2 Zn finger 200..220 CDD:275368 5/19 (26%)
C2H2 Zn finger 228..248 CDD:275368 2/19 (11%)
C2H2 Zn finger 256..276 CDD:275368 10/19 (53%)
C2H2 Zn finger 284..304 CDD:275368 3/32 (9%)
C2H2 Zn finger 311..331 CDD:275368 6/19 (32%)
C2H2 Zn finger 339..359 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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