DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and si:dkeyp-113d7.1

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_999959.1 Gene:si:dkeyp-113d7.1 / 407709 ZFINID:ZDB-GENE-030131-755 Length:498 Species:Danio rerio


Alignment Length:486 Identity:111/486 - (22%)
Similarity:181/486 - (37%) Gaps:106/486 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CGAVDLSDTGSSSSMRYETLSAKVPSSQKTVSLVLTHLA--NCIQTQLDLKPGARLCPRCFQELS 69
            ||...|:...|..|         .|:.....|.::..:|  .||:::.||.|           :.
Zfish    32 CGTPTLTMLSSECS---------TPTLSSLASEIVEPMAMLPCIKSEPDLDP-----------IR 76

  Fly    70 DYDTIMVNLMTTQKRLTTQLK-------------------------GALKSEFE----------V 99
            ..|..::..::|.:..:.|:|                         |:.||.:|          |
Zfish    77 TVDLSVIQPLSTAELGSDQIKMEISGLDYIKSEHHSDLHSFHSTELGSYKSHYEPSLVFDYISHV 141

  Fly   100 PESGEDILVEEVEIPQSDVETDADAEADALFVEL--------VKDQ---------EESDTEIKR- 146
            .:|.|.|..|.    .||:.:...:|...:..|.        :|.:         .|..||:.: 
Zfish   142 SDSLEYIKSEH----HSDLHSYYASELGTIKTEYEPIFMTSHIKTEMNGLESIHMAELRTELDKL 202

  Fly   147 ---EFVDEEEEEDDDDDDEFICE--DVDVGDSEALYGKSSDGEDRPTKKRVKQ-------ECTTC 199
               ..:|...:.|.|.....:.|  .|....::|.:..:|.....||.::.:.       .||.|
Zfish   203 RPETLIDGIGKLDSDFSSNSLYELTSVHANKAQAAHHPTSTKGHGPTPRKPRNPTGEKPFSCTQC 267

  Fly   200 GKVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPV 264
            ||.:::...|:.| ...|:.:..:.|..||........|:.|..:|.|:....|.:|||.|::..
Zfish   268 GKNFSTLGNLKTH-KRIHTGERPYTCSQCGKSFGQAGNLKRHQLIHTGQKPYTCAHCPKGFTKAD 331

  Fly   265 NTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLI 329
            :...|.|:|..:|.:.|.:||..|||...|..|:|.|.. |.|..||:|..||....::.:|..|
Zfish   332 DLRSHQRLHTGEKPFSCAECGKSFSQTKELKAHQLSHTG-ERPFCCSLCGKSFSKETSYRNHQQI 395

  Fly   330 HKENRPRHYCSVCPKSFTERYTLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVT 394
            |...:| :.||.|.|||:....||.|.|.|.|:..:|..:......:....:.|..:...|...|
Zfish   396 HMGEKP-YSCSQCGKSFSNSGVLKTHEKIHSGERPFGCTQCGKHFGRLGHLKAHQQIHTGERPYT 459

  Fly   395 VIMSDNDENSGFCLICNTNFENKKELEHHLQ 425
                        |..|..||.....|:.|.|
Zfish   460 ------------CQQCGKNFSQSGHLKAHEQ 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 50/154 (32%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
C2H2 Zn finger 281..301 CDD:275368 9/19 (47%)
C2H2 Zn finger 310..327 CDD:275370 5/16 (31%)
zf-C2H2 337..359 CDD:278523 10/21 (48%)
C2H2 Zn finger 339..359 CDD:275368 10/19 (53%)
si:dkeyp-113d7.1NP_999959.1 COG5048 <260..414 CDD:227381 51/156 (33%)
C2H2 Zn finger 264..284 CDD:275368 7/20 (35%)
zf-H2C2_2 276..299 CDD:290200 6/23 (26%)
C2H2 Zn finger 292..312 CDD:275368 5/19 (26%)
zf-H2C2_2 304..328 CDD:290200 8/23 (35%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
zf-H2C2_2 332..357 CDD:290200 8/24 (33%)
C2H2 Zn finger 348..368 CDD:275368 9/19 (47%)
zf-H2C2_2 360..384 CDD:290200 10/24 (42%)
C2H2 Zn finger 376..396 CDD:275368 6/19 (32%)
zf-H2C2_2 388..413 CDD:290200 10/25 (40%)
C2H2 Zn finger 404..424 CDD:275368 10/19 (53%)
C2H2 Zn finger 432..452 CDD:275368 1/19 (5%)
zf-H2C2_2 444..469 CDD:290200 7/36 (19%)
C2H2 Zn finger 460..480 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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