DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and CG10543

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001369100.1 Gene:CG10543 / 37379 FlyBaseID:FBgn0034570 Length:1666 Species:Drosophila melanogaster


Alignment Length:476 Identity:95/476 - (19%)
Similarity:155/476 - (32%) Gaps:149/476 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PSSQKTVSLVLTHLANCIQTQLDLKPG---------------ARLCPRCFQELSDYD------TI 74
            ||....:|:.:.:        :|||.|               :.|..:..|:...|:      ::
  Fly   535 PSDHIPISMPMEN--------MDLKAGQAAHGTANAIMQGGSSSLASQLHQQQKPYNSSNNPLSM 591

  Fly    75 MVNLMTTQKRLTTQLKGALKSEFEVPESGEDILVEEVEIPQSDVETDADAEADALF-------VE 132
            |..:|..|:          :....:|.....:::...:.||.........:..||.       ..
  Fly   592 MGGMMQQQQ----------QQHVAMPHHQRQMMMMPEDFPQHGASMMNSRQMPALAALSNLGDTP 646

  Fly   133 LVKDQEESDTEIKREFVDEEEEEDDDDDDEFICEDVDVGDSEALYGKSS---------------- 181
            .:..|..|..|:....:..:|::||.|.|   .:::|....:.:.|.||                
  Fly   647 AMSGQLNSSLELDDNDLSADEDDDDLDHD---LDELDAAKQQLIDGGSSSSTSLQAPPSQHGSGS 708

  Fly   182 --DGEDRPTKKRVK--QECTTCGKVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLE--L 240
              .|...|..|:.|  ..|..|.|.|..    :|.:.:.:...|.: |..||  :|:...||  :
  Fly   709 GGSGGQTPGSKKDKPSYNCLLCPKSYRK----RKSLLDHYKMHPGY-CHDCG--QRNGNTLEEII 766

  Fly   241 HMN--LHEGKTEKQCRYCPKSFSRPVNTLRHMRMH----------------WDKKKYQ------- 280
            |.|  :|..:....|..|.:|:||......|:..|                :.:||.|       
  Fly   767 HHNRTMHVKEFPFVCETCGESYSRKQQFHAHVESHNKKEIKTFPCGECGLKFPQKKLQQHFEETG 831

  Fly   281 -------CEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIHKENRPRHY 338
                   ||.||..|...|.||.|.:|....:|...|.||:..|..:.....|..:|.|.:..:.
  Fly   832 HKADGAICEVCGEEFQSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEIKRPYV 896

  Fly   339 CSVCPKSFTERYTLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVTVIMSDNDEN 403
            |.:|..|:.....||.|                       ....||||.|.:             
  Fly   897 CDLCGSSYFTYPALKEH-----------------------YSNAHVDVSECK------------- 925

  Fly   404 SGFCLICNTNFENKKELEHHL 424
               |.:|...|.:.|.|:.||
  Fly   926 ---CTLCGKRFGSAKSLQRHL 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 45/188 (24%)
C2H2 Zn finger 225..245 CDD:275368 8/23 (35%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
C2H2 Zn finger 281..301 CDD:275368 9/19 (47%)
C2H2 Zn finger 310..327 CDD:275370 4/16 (25%)
zf-C2H2 337..359 CDD:278523 6/21 (29%)
C2H2 Zn finger 339..359 CDD:275368 6/19 (32%)
CG10543NP_001369100.1 C2H2 Zn finger 727..747 CDD:275368 5/23 (22%)
C2H2 Zn finger 751..773 CDD:275368 8/23 (35%)
C2H2 Zn finger 781..801 CDD:275368 6/19 (32%)
PHA00733 <804..860 CDD:177301 13/55 (24%)
C2H2 Zn finger 811..827 CDD:275368 3/15 (20%)
C2H2 Zn finger 839..860 CDD:275368 10/20 (50%)
C2H2 Zn finger 868..888 CDD:275368 5/19 (26%)
C2H2 Zn finger 897..913 CDD:275368 5/15 (33%)
C2H2 Zn finger 926..946 CDD:275368 7/18 (39%)
C2H2 Zn finger 954..975 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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