Protein Alignment Sry-delta and CG18011

DIOPT Version :10

• Sequence 1: NP_524581.1
• Gene: Sry-delta / 43572
• FlyBaseID: FBgn0003512
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_610559.1
• Gene: CG18011 / 36068
• FlyBaseID: FBgn0033491
• Length: 985
• Species: Drosophila melanogaster
• Alignment Length: 533
• Identity: 113/533 - (21%)
• Similarity: 182/533 - (34%)
• Gaps: 140/533 - (26%)

  Fly    25 TLSAKVPSSQKTVSLVLTHLANCIQTQLDLKPGARL----------------------CPRCFQE 67
            |..|..|:.:...|..||.:...:......:|.||:                      .|.....
  Fly   105 TPPAAKPAKKTVPSRPLTKVLRPVPIIPTREPSARIRNRAAAASNVTPDTSRSPEPPETPSTEDA 169

  Fly    68 LSDYDTIMVNLMTTQKRLTTQLKGALKSEFEV--------PESGEDILV-EEVEIP------QSD 117
            :|..:..:|:.:..|:..:..::..|..|..|        .||.|.:.| ||.|.|      .|:
  Fly   170 VSKSEPKLVSKVADQEHFSVLIQNILDEEEAVVEDETAVKEESSEAVQVTEETEAPGQIVILNSE 234

  Fly   118 VETDADAEADALFVEL--VKDQEESDTEIK------REFVDEEEEEDDDDDDE------FICEDV 168
            ..||.:.:.:....|.  |.|....:.::|      |.....||.:.|||.||      .:...|
  Fly   235 AVTDTNPDENVYIYEHEDVMDPNLDNVKVKPISCSSRLVAQAEESQSDDDIDEGETSNVVLFNFV 299

  Fly   169 DVGDSE---------ALYGKSSDGEDRPTKKRVKQECTT---CGKVYNSWYQLQKHISEEH-SKQ 220
            |:.:.:         |...|:|      .:|...|.||.   |.....::..|..|:|:.| |::
  Fly   300 DIKEKDEVDNIPEYLATVVKTS------FEKLTFQWCTVCKHCSLKCPTFESLFSHLSKAHKSRR 358

  Fly   221 PNHICPI--CGVIRRDEEYLELHM-NLHEGKTE----KQCRYCPKSFSRPVNTLRHMRMHWDKKK 278
            ..:.|||  |....:..::|.:|: .||....|    ..|..|..:||..:...:|...|..|||
  Fly   359 DVYECPIEGCNKELKGRKFLAMHLVLLHAPVAEIPIYGSCPECKLTFSNILQYNKHSCAHVIKKK 423

  Fly   279 ----YQCEKCGLRF---------SQDNL--------------------LYNHRLRHEAEENPIIC 310
                ..||.|.|.|         ||.:|                    |:.|..........:.|
  Fly   424 RGFRSYCEMCSLEFPSWKRFNFHSQFHLEKHRPRACFVCDYATTNIDELFQHLNYSHEPVGTLFC 488

  Fly   311 SICNVSFKSRKTFNHHTLIHKENRPRHY-CSVCPKSFTERYTLKMHMKTHEGDVV---YGVREEA 371
            .:|:.:|:....|..|...|.......| ||.|..:|..|..|..||:...|.|:   ...||.|
  Fly   489 DLCDRTFRDPSVFMEHNKSHANVSSTTYSCSECMANFESRGRLNGHMRAMHGSVISCELCSREFA 553

  Fly   372 PADEQQVVEELH--VDVDESEAAVTVIMSDNDE------------------------NSGFCLIC 410
            ......:..:.|  ::.|....:...::||:.|                        ::..|..|
  Fly   554 TEATYNIHMKKHLIIEKDVHVCSTCGLLSDSRETLLAHVNSVKTACFGSKIDVELLRDAYVCEYC 618

  Fly   411 NTNFENKKELEHH 423
            ::.|:.|..|:.|
  Fly   619 SSYFKEKDCLQAH 631

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sry-delta	NP_524581.1	COG5048	<205..360	CDD:227381	48/196 (24%)
		C2H2 Zn finger	225..245	CDD:275368	6/22 (27%)
		C2H2 Zn finger	253..273	CDD:275368	5/19 (26%)
		C2H2 Zn finger	281..301	CDD:275368	10/48 (21%)
		C2H2 Zn finger	310..327	CDD:275370	4/16 (25%)
		C2H2 Zn finger	339..359	CDD:275368	8/19 (42%)
CG18011	NP_610559.1	C2H2 Zn finger	488..508	CDD:275368	5/19 (26%)
		C2H2 Zn finger	518..538	CDD:275368	8/19 (42%)
		C2H2 Zn finger	545..565	CDD:275368	3/19 (16%)
		C2H2 Zn finger	575..596	CDD:275371	3/20 (15%)
		C2H2 Zn finger	754..775	CDD:275368
		C2H2 Zn finger	780..801	CDD:275368
		C2H2 Zn finger	809..829	CDD:275368
		SUF4-like	852..>891	CDD:411020
		C2H2 Zn finger	864..885	CDD:411020
		C2H2 Zn finger	864..885	CDD:275368
		C2H2 Zn finger	891..917	CDD:275368