DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and CG12299

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster


Alignment Length:479 Identity:89/479 - (18%)
Similarity:146/479 - (30%) Gaps:166/479 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 QSDVETDADAEADALFV-----ELVKDQEESDTEIKREFVDEEEEEDDDDDDEFICEDVDVGDSE 174
            |.:.|:..|...|..::     ||.:|..:|.........|.....||||||:   :|.....|.
  Fly    79 QQEQESPGDESEDYSWIFEPVCELAEDGSDSSDGSASSGSDSSSSSDDDDDDD---DDDSSSSSS 140

  Fly   175 ALYGKSSDGEDRPT--------------------------------------------------- 188
            :....||.....||                                                   
  Fly   141 SSSNSSSSSSSVPTTSNSNTQQSQESVQPLHGLVAGPGYNEFQLQMTDPRESTSIFMVQPTVSVT 205

  Fly   189 ------------------------KKRVKQ-------------------ECTTCGKVYNSWYQLQ 210
                                    ::|.::                   :||.|...:.:...|.
  Fly   206 PLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDLS 270

  Fly   211 KHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWD 275
            ||:....:.:|.. |.||.........|..|:.:|.|:...:|..|||:|::..:.:.|||.|..
  Fly   271 KHVRSHITNKPFQ-CSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSV 334

  Fly   276 KKKYQ-----------------------------CEKCGLRFSQDNLLYNHRLRHEAE------- 304
            :|.:|                             |.:|...|..:.||..|...|..|       
  Fly   335 RKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAI 399

  Fly   305 --------------------ENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTER 349
                                |.|..||:|:.||....:.|.|..||...:| ..|.:|.|.||:.
  Fly   400 CREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKP-FQCKLCDKCFTQA 463

  Fly   350 YTLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVT------VIMSDNDENSGFCL 408
            .:|.:|||.|.|:..|.......:..||.....|:...:..:|.:      ::::.....:..|:
  Fly   464 SSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQPHETLVCI 528

  Fly   409 ICNTNFENKKELEHHLQFDHDVVL 432
            :|.:...:...|..|:...|..:|
  Fly   529 VCGSLHADATALASHVHSQHAALL 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 51/210 (24%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..327 CDD:275370 6/16 (38%)
zf-C2H2 337..359 CDD:278523 9/21 (43%)
C2H2 Zn finger 339..359 CDD:275368 9/19 (47%)
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 33/159 (21%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
zf-H2C2_2 268..293 CDD:290200 7/25 (28%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
zf-H2C2_2 296..321 CDD:290200 9/24 (38%)
zf-C2H2_2 312..>387 CDD:289522 17/74 (23%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 0/19 (0%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 0/19 (0%)
zf-H2C2_2 409..434 CDD:290200 7/24 (29%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:290200 9/25 (36%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
zf-H2C2_2 465..490 CDD:290200 7/24 (29%)
C2H2 Zn finger 481..501 CDD:275368 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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