DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and zf30C

DIOPT Version :10

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:22 Identity:9/22 - (40%)
Similarity:10/22 - (45%) Gaps:1/22 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DEFWSPTAVL-GGCCPGCVRGL 73
            ||...|...| ..|.|.||:.|
  Fly     4 DEVVDPKKYLEESCKPKCVKPL 25

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381
C2H2 Zn finger 225..245 CDD:275368
C2H2 Zn finger 253..273 CDD:275368
C2H2 Zn finger 281..301 CDD:275368
C2H2 Zn finger 310..327 CDD:275370
C2H2 Zn finger 339..359 CDD:275368
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370
COG5048 <523..>672 CDD:227381
C2H2 Zn finger 546..566 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 603..624 CDD:275368
C2H2 Zn finger 632..652 CDD:275368
C2H2 Zn finger 660..680 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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