DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and CG10959

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster


Alignment Length:447 Identity:98/447 - (21%)
Similarity:150/447 - (33%) Gaps:124/447 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VLTH-LANC----IQTQLDLKPGARLCPRCFQELSDYDTIMVNLMTTQKR--------------- 84
            :|.| |||.    :..|..|:|   .|...|.|.......:|.|:...|.               
  Fly     1 MLRHCLANVDYVRLHAQQQLRP---KCGEIFYEPEANRFQLVCLLCDMKHFGFEDFARHIRNVHF 62

  Fly    85 ------LTTQLKGALKSEFEVPE----SGEDILVEEVE---IPQSDV-ETDADAEADALFVELVK 135
                  ||..:.|..:...|..|    |.|.:.|:..:   :|..|| ..:.|||.     ||..
  Fly    63 DKQGRPLTKTVTGLGRLAREEQEFQGVSAEPLAVDSFKKEYLPNEDVLSEEEDAEQ-----ELGL 122

  Fly   136 DQEESD----------TEIKREFVDEEEEEDDDDDDEFICEDVDVGDSEAL--------YGKSSD 182
            :|:|.:          ..:..|.:|...:.|.|.....:.|...:   |||        |....|
  Fly   123 EQDEGNPLRIMVLGGKQSVDEETIDTMWQPDHDSSSASVNEGCAL---EALLGVENPQDYQPDED 184

  Fly   183 GEDRPT---KKRVKQE--CTTCGKVYNSWYQLQKHISEEH-----------------------SK 219
            ||:..:   |:|..::  |..|.:.|.:...|..|:...|                       .:
  Fly   185 GEEHQSVFKKQRQPKDYNCPHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHR 249

  Fly   220 QPNH---ICPICGVIRRDEEYLELHMNLHEGKTEKQCRY--CPKSFSRPVNTLRHMRMHWDKKKY 279
            :..|   .|.:|..:.:....|..|:..|.|....:|.:  |.|||....|...|.|:|.:::.|
  Fly   250 RKEHTEFACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNY 314

  Fly   280 QCEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIHKENRP--------- 335
            .||.||.|......|..||..|..|: |..|..|...|.|:...|.|..:|...:|         
  Fly   315 VCELCGYRSRYREALIVHRRTHTGEK-PFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSA 378

  Fly   336 ----------RHY--------CSVCPKSFTERYTLKMHMKTHEGDVVYGVREEAPAD 374
                      :|.        |.:|..::.:...|..||:.|:........|.|.|:
  Fly   379 FSRPKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAHKLQASVNATEGAEAE 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 45/209 (22%)
C2H2 Zn finger 225..245 CDD:275368 4/19 (21%)
C2H2 Zn finger 253..273 CDD:275368 8/21 (38%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
C2H2 Zn finger 310..327 CDD:275370 5/16 (31%)
zf-C2H2 337..359 CDD:278523 6/29 (21%)
C2H2 Zn finger 339..359 CDD:275368 5/19 (26%)
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 0/20 (0%)
COG5048 <258..416 CDD:227381 39/158 (25%)
C2H2 Zn finger 258..278 CDD:275368 4/19 (21%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
zf-H2C2_2 328..353 CDD:290200 9/25 (36%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
zf-H2C2_2 357..381 CDD:290200 4/23 (17%)
C2H2 Zn finger 372..392 CDD:275368 1/19 (5%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I2552
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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