DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and CG2129

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_572449.1 Gene:CG2129 / 31741 FlyBaseID:FBgn0030008 Length:465 Species:Drosophila melanogaster


Alignment Length:389 Identity:80/389 - (20%)
Similarity:147/389 - (37%) Gaps:120/389 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DLKPGARLCPRCFQELSDYDTIMVNLMTTQKRLTTQLKGALKSEFEVPESGEDILVEEVEIPQSD 117
            |.:||     |...:..|:.::      |.:.| .|:: |||.:::..:|.::         :..
  Fly   122 DERPG-----RSIIKWQDHQSL------TSESL-RQVR-ALKVDYKEEDSEQE---------ECG 164

  Fly   118 VETDADAEA--DALF-------VELVKDQEESDTEIKREFVDEEEEEDDDDDDEFICEDVDVGDS 173
            :|.|.|:|.  .|..       .::.:.::..:..|.|:..|....:.|.:|.::          
  Fly   165 MELDLDSEGRHSAKIPHSCPHCTKVYQSRKVLERHIMRQHKDTLSPDVDSEDADY---------- 219

  Fly   174 EALYGKSSDGEDRPTKKRVKQ-ECTTCGKVYNSWYQLQKHISEEH-----------------SKQ 220
                   ...:|.|.|...:: :|..|||:|:..|.|::|:..:|                 ::.
  Fly   220 -------EPPKDAPVKSAAQEYKCEHCGKIYHGKYSLRQHLKRDHDNGEEGGSAIFTCLECEAQL 277

  Fly   221 P------NHI--------CPICGVIRRDEEYLELHMNLHEGKTEKQCRY--CPKSFSRPVNTLRH 269
            |      .|:        |.:||...:....|:.|...|..:....|.:  |.|.|.    |:||
  Fly   278 PRLRLLDEHMVQAHGGAACVVCGRRYKTRHELKRHQLKHTSERNVPCPHPGCGKRFF----TIRH 338

  Fly   270 MR----MHWDKKKYQCEKCGL----------------------------RFSQDNLLYNHRLRHE 302
            ||    :|.::|.:.||.||.                            ||...:.|..|...| 
  Fly   339 MRNHGKVHTEQKNFVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCDKRFPSHSGLREHMAMH- 402

  Fly   303 AEENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYTLKMHMKTHEGDVVYG 366
            :.|.|.:||:|..:|..:|...||..:|.:.: :..|.:|..::.:...|..||:.|..|.:.|
  Fly   403 STERPHVCSVCGATFSRQKGLYHHKFLHADTK-QFVCKLCGNAYAQAAGLAGHMRKHRNDELNG 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 47/219 (21%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
C2H2 Zn finger 253..273 CDD:275368 9/25 (36%)
C2H2 Zn finger 281..301 CDD:275368 8/47 (17%)
C2H2 Zn finger 310..327 CDD:275370 6/16 (38%)
zf-C2H2 337..359 CDD:278523 5/21 (24%)
C2H2 Zn finger 339..359 CDD:275368 5/19 (26%)
CG2129NP_572449.1 C2H2 Zn finger 296..316 CDD:275370 5/19 (26%)
zf-C2H2_8 323..411 CDD:292531 22/92 (24%)
C2H2 Zn finger 327..346 CDD:275368 8/22 (36%)
C2H2 Zn finger 354..374 CDD:275368 4/19 (21%)
zf-H2C2_2 367..389 CDD:290200 0/21 (0%)
C2H2 Zn finger 382..402 CDD:275368 4/19 (21%)
zf-H2C2_2 395..419 CDD:290200 9/24 (38%)
C2H2 Zn finger 410..430 CDD:275368 7/19 (37%)
C2H2 Zn finger 438..458 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440002
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I2552
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.980

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