DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and CG2120

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster


Alignment Length:354 Identity:80/354 - (22%)
Similarity:125/354 - (35%) Gaps:118/354 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 ELSDYDTIMVNLMTTQKRLTTQLKGALKSEFEVPESGEDILVE-EVEIPQSDVETDADAEADALF 130
            :|.:||..:.:|     :|..||:..         |||.:.:| |:..|.|:.:          .
  Fly    19 DLGNYDVCLEDL-----QLFAQLEDL---------SGERLPMEMELLNPGSEYD----------L 59

  Fly   131 VELVKD--QEESDTEIKREFVDEEEEEDDDDDDEFICEDVDVGDSEALYGKSSDGEDRPTKKRVK 193
            :|||..  |:.:.||.|               ...:|:.                :..||.||.:
  Fly    60 LELVNGALQQRNTTEHK---------------PTDMCKP----------------KRTPTTKRHR 93

  Fly   194 -----QECTTCGKVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTEKQC 253
                 ..|..|.:.::..|.|:.| ...|:.:..|:|..||...|....|.:|...|..:...:|
  Fly    94 TTGKDHTCDICDRRFSEAYNLRIH-KMTHTDEKPHVCVECGKGFRQLNKLRIHAVTHTAERPHKC 157

  Fly   254 RYCPKSFSRPVNTLR-HMRMHWDKKKYQC--EKCGLRFSQDNLLYNH-RLRHEAEENP------- 307
            ..|.|.| |..|.|. |.|:|..:|.|.|  ..|.|.|...:....| :|||.|:.:|       
  Fly   158 DICGKGF-RYANYLTVHRRLHTGEKPYPCLATDCHLSFHSIHARRIHTKLRHAAQTDPDPEHPLA 221

  Fly   308 -----------IICSICN--------VSFKSRKTFN----------------------HHTLIHK 331
                       ..|.:|:        :|...::.:|                      ||.:.|.
  Fly   222 EQEQRDTSALSFTCPVCSRVLTDQCYLSIHLKRHYNQRDFPCPQPECGKRFFSASELKHHQIAHT 286

  Fly   332 ENRPRHYCSVCPKSFTERYTLKMHMKTHE 360
            :.|| ..|.:||..|..:...|.|:|.||
  Fly   287 QQRP-FACPLCPARFLRKSNHKQHLKVHE 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 50/206 (24%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..273 CDD:275368 9/20 (45%)
C2H2 Zn finger 281..301 CDD:275368 6/22 (27%)
C2H2 Zn finger 310..327 CDD:275370 5/46 (11%)
zf-C2H2 337..359 CDD:278523 7/21 (33%)
C2H2 Zn finger 339..359 CDD:275368 7/19 (37%)
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 5/20 (25%)
zf-H2C2_2 113..138 CDD:290200 7/25 (28%)
C2H2 Zn finger 129..149 CDD:275368 6/19 (32%)
zf-H2C2_2 142..166 CDD:290200 7/24 (29%)
COG5048 151..>264 CDD:227381 26/113 (23%)
C2H2 Zn finger 157..177 CDD:275368 9/20 (45%)
C2H2 Zn finger 185..206 CDD:275368 5/20 (25%)
C2H2 Zn finger 235..255 CDD:275368 3/19 (16%)
C2H2 Zn finger 263..285 CDD:275368 2/21 (10%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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