DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and dwg

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_477338.3 Gene:dwg / 31265 FlyBaseID:FBgn0000520 Length:592 Species:Drosophila melanogaster


Alignment Length:471 Identity:100/471 - (21%)
Similarity:159/471 - (33%) Gaps:143/471 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 THLANCIQTQLDLKPGARLCPRCFQELSDYDTIMVNLMTTQKRLTTQLKGALKSE------FEVP 100
            ||..|..| |.|.:..|      |....:|  :|:.::..::.....|...|..|      ..|.
  Fly   107 THSPNQSQ-QHDQQQQA------FDSTEEY--VMIEMLNEEQENVANLDEELAEEDRRIFAMTVD 162

  Fly   101 ESGEDILVEEVEIPQSD--------VETDADAEADALFVELVKDQEESDTE---IKREF---VDE 151
            |. |:.|.|||:  |.|        :....|.:.:.:.:|.|.:.:.::.|   ||.||   |.|
  Fly   163 EE-EEFLTEEVD--QDDELSEEEHQLAQSGDQQEEHITMESVHEFQPAEVEYVTIKNEFETIVTE 224

  Fly   152 EEE--------------------------------------EDDDDDDEFICEDVDVGDSEALYG 178
            |:|                                      |.|..::..:.|..||.:.|....
  Fly   225 EDEFEVMNDSGAHDAILDCQMIVIPAEGAIDEVIGEETLELEGDGREEHLLPEAEDVCEDEDFLE 289

  Fly   179 KSSDGEDRPTKKRVKQECTTCGKVYNSWYQLQKHISEEHSKQPNHICPICGV-IRRDEEYLELHM 242
            :|.|.......:.:...||.|.|.:....:|.:|: ..|..:..:.|..||. ::....|.| ||
  Fly   290 ESLDSAPPTAGEALPYVCTVCQKAFRQQCRLNQHM-RSHVDEKQYECEECGKRLKHLRNYKE-HM 352

  Fly   243 NLHEGKTEKQCRYCPKSFSRPVNTLR-HMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLRHEAE-- 304
            ..|......||..|.: |.|..::|. |.|.|.:||.|.|::||..::..:.|..|:|.|..|  
  Fly   353 LTHTNVKPHQCSICGR-FYRTTSSLAVHKRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERP 416

  Fly   305 -------------------------ENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPK 344
                                     :....|.||.|....:..:..|.::|...: .|.|.||..
  Fly   417 YACDLCDKAYYDSSSLRQHKISHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVK-AHKCDVCGH 480

  Fly   345 SFTERYTLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVTVIMSDNDENSGFCLI 409
            :||....|..|::.|.|:..:.                                        |.:
  Fly   481 AFTFTSNLNAHVRLHSGEKPFK----------------------------------------CEV 505

  Fly   410 CNTNFENKKELEHHLQ 425
            |...|..||.|..|::
  Fly   506 CVKAFPTKKRLASHMR 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 45/183 (25%)
C2H2 Zn finger 225..245 CDD:275368 7/20 (35%)
C2H2 Zn finger 253..273 CDD:275368 7/20 (35%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..327 CDD:275370 4/16 (25%)
zf-C2H2 337..359 CDD:278523 8/21 (38%)
C2H2 Zn finger 339..359 CDD:275368 7/19 (37%)
dwgNP_477338.3 zf-AD 14..91 CDD:214871
COG5048 <297..451 CDD:227381 37/156 (24%)
C2H2 Zn finger 307..327 CDD:275368 6/20 (30%)
C2H2 Zn finger 335..355 CDD:275368 7/20 (35%)
C2H2 Zn finger 363..383 CDD:275368 7/20 (35%)
COG5048 <387..523 CDD:227381 33/176 (19%)
C2H2 Zn finger 391..411 CDD:275368 6/19 (32%)
zf-H2C2_2 403..426 CDD:290200 5/22 (23%)
C2H2 Zn finger 419..439 CDD:275368 0/19 (0%)
C2H2 Zn finger 447..467 CDD:275368 5/19 (26%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)
zf-H2C2_2 487..510 CDD:290200 6/62 (10%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BMXZ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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