DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and LOC1279417

DIOPT Version :10

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_061512020.1 Gene:LOC1279417 / 1279417 VectorBaseID:AGAMI1_005789 Length:656 Species:Anopheles gambiae


Alignment Length:201 Identity:70/201 - (34%)
Similarity:105/201 - (52%) Gaps:14/201 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 ICEDVDVGDSEAL--YGKSSDGEDRPTKKRVKQECTTCGKVYNSWYQLQKHIS-EEHSKQPNHIC 225
            ||:.: .|:.:.|  :.||        .|..:.||..|||.::.....:.|:| ...:|:....|
Mosquito   429 ICDKI-FGNQDTLMTHEKS--------HKTPRFECEECGKGFSQLRNYKYHVSVHRGTKEFAAKC 484

  Fly   226 PICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQ 290
            |.||.:..|:.||..|:.:|..|.|..|.:|||||::.|....|:|:|...|.::|.:||.|||:
Mosquito   485 PECGKMFNDKGYLSSHLKIHRNKKEYSCPHCPKSFNQRVAFNMHVRIHTGVKPHKCNECGKRFSR 549

  Fly   291 DNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYTLKMH 355
            ..||..| ||..:.|.|..||:|..||..|.....|..:|...:| ..|.:|||:||:::.||.|
Mosquito   550 KMLLKQH-LRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKP-FACPICPKAFTKKHHLKTH 612

  Fly   356 MKTHEG 361
            :..|.|
Mosquito   613 LNYHTG 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 56/155 (36%)
C2H2 Zn finger 225..245 CDD:275368 8/19 (42%)
C2H2 Zn finger 253..273 CDD:275368 9/19 (47%)
C2H2 Zn finger 281..301 CDD:275368 10/19 (53%)
C2H2 Zn finger 310..327 CDD:275370 6/16 (38%)
C2H2 Zn finger 339..359 CDD:275368 9/19 (47%)
LOC1279417XP_061512020.1 None

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