DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and LOC108183935

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_017211249.1 Gene:LOC108183935 / 108183935 -ID:- Length:358 Species:Danio rerio


Alignment Length:397 Identity:88/397 - (22%)
Similarity:144/397 - (36%) Gaps:122/397 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VPESGEDILVEEV-EIPQSDVETDADAEADALFVELVKDQEESDTEIKREFVDEEEEEDDDDDDE 162
            |.|..||:.:||. .:.|.|:                  ||::|..:.:|...::.|.::     
Zfish     4 VKEESEDVKIEETFTVKQEDL------------------QEQTDLMLLKEKTHQQNEMEE----- 45

  Fly   163 FICEDVDVGDSEALYGKS-SDGEDRPTKKRVKQECTTCGKVYNSWYQLQKHISEEHSKQPNHICP 226
             |.:|:...:...|..|: |.|..|.:|......|..|||.::...:|..|| .:|:::..:.|.
Zfish    46 -IQQDMTTDEKPTLTKKTLSRGRHRKSKPSCNFSCKQCGKSFSQKPKLDVHI-RDHTREKAYTCK 108

  Fly   227 ICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQD 291
            .||....:...|.:||.:|.|:....|:.|.|||.:..|...|||:|..::.|.|::||..|...
Zfish   109 QCGKSFYNTRNLTVHMRIHTGERPYTCQQCGKSFHKTGNLTVHMRIHTGERPYTCQQCGKSFQTT 173

  Fly   292 NLLYNHRLRHEAE---------------------------------------------------- 304
            ..|..|...|..|                                                    
Zfish   174 GNLTVHMRIHTGEKPYSCPQCGKSYNQNSNLEVHMRTHNGGRTFVCTQCGKSFAQKQNLDLHMRI 238

  Fly   305 ---ENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYTLKMHMKTHEGDVV-- 364
               |.|..|:.|..||..:.|..||.::|...:| ..|:.|.||||.:..|:.||..|.|.:|  
Zfish   239 HTGEKPYTCTECGKSFPYKSTLKHHMIVHTGEKP-FACAQCGKSFTCKANLRNHMNGHTGTIVFT 302

  Fly   365 -----------YGVREEAPADEQQVVEELHVDVDESEAAVTVIMSDNDENSGFCLICNTNFENKK 418
                       |.::.             |:.....|..:             |:.|...|::|:
Zfish   303 CDLCGKSLTHKYSIKN-------------HMKTHSGERFI-------------CIECGKGFKHKR 341

  Fly   419 ELEHHLQ 425
            .|.:|::
Zfish   342 SLSNHME 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 51/209 (24%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..273 CDD:275368 9/19 (47%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..327 CDD:275370 6/16 (38%)
zf-C2H2 337..359 CDD:278523 9/21 (43%)
C2H2 Zn finger 339..359 CDD:275368 9/19 (47%)
LOC108183935XP_017211249.1 C2H2 Zn finger 79..99 CDD:275368 7/20 (35%)
C2H2 Zn finger 107..127 CDD:275368 6/19 (32%)
zf-H2C2_2 119..144 CDD:316026 10/24 (42%)
C2H2 Zn finger 135..155 CDD:275368 9/19 (47%)
zf-H2C2_2 147..170 CDD:316026 9/22 (41%)
C2H2 Zn finger 163..183 CDD:275368 6/19 (32%)
COG5048 <187..346 CDD:227381 31/185 (17%)
C2H2 Zn finger 191..211 CDD:275368 0/19 (0%)
C2H2 Zn finger 219..239 CDD:275368 0/19 (0%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
C2H2 Zn finger 275..295 CDD:275368 9/19 (47%)
C2H2 Zn finger 303..323 CDD:275368 2/32 (6%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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