DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and znf1034

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_017211154.1 Gene:znf1034 / 103910745 ZFINID:ZDB-GENE-120703-37 Length:512 Species:Danio rerio


Alignment Length:244 Identity:70/244 - (28%)
Similarity:104/244 - (42%) Gaps:19/244 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 CTTCGKVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSF 260
            ||.|||.:::...|.:|: ..|:.:....|..||.......||..||.:|.|:....|..|.|||
Zfish   235 CTQCGKSFSNSANLNQHM-RIHTGEKPFTCTQCGKSFSQSSYLNQHMRIHTGEKPFTCSQCGKSF 298

  Fly   261 SRPVNTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNH 325
            |:.....:|||:|..:|.:.|.:||..|||.:.||.| :|....|.|..|:.|..||......|.
Zfish   299 SQSPYLNQHMRIHTGEKPFTCSQCGKSFSQSSSLYLH-MRIHTGEKPFTCTQCGKSFSKSSNLNI 362

  Fly   326 HTLIHKENRPRHYCSVCPKSFTERYTLKMHMKTHEGDVVYGVREEAPADEQQVVEELHV------ 384
            |...|...:| ..|..|.|||::..:|.:||:.|.|:..:...:...:..|.....:|:      
Zfish   363 HMRNHTGEKP-FTCLQCGKSFSQSTSLNLHMRIHTGEKPFTCTQCGKSFSQSSNPNIHMRNHIGE 426

  Fly   385 ----------DVDESEAAVTVIMSDNDENSGFCLICNTNFENKKELEHH 423
                      ...:|.:....:|....|....||.|...|....||:.|
Zfish   427 KPFTCTQCEKSFSQSTSLNRQMMIHTGEKEFMCLKCENTFITAAELKRH 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 51/154 (33%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
C2H2 Zn finger 253..273 CDD:275368 9/19 (47%)
C2H2 Zn finger 281..301 CDD:275368 9/19 (47%)
C2H2 Zn finger 310..327 CDD:275370 5/16 (31%)
zf-C2H2 337..359 CDD:278523 8/21 (38%)
C2H2 Zn finger 339..359 CDD:275368 8/19 (42%)
znf1034XP_017211154.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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