DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and LOC101882575

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_021326494.1 Gene:LOC101882575 / 101882575 -ID:- Length:346 Species:Danio rerio


Alignment Length:366 Identity:91/366 - (24%)
Similarity:145/366 - (39%) Gaps:64/366 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QELSDYDTIMVNLMTTQKRLTTQLKGALKSEFEVPESGEDILVEEVEIPQSDVETDADAEADALF 130
            |.||.:..:|:..:.::   .|:.:..:|..| :.|..|||.:||....:.: ||:     :|..
Zfish    14 QRLSHFPLLMMLFILSK---PTEQQIIIKMAF-IKEESEDIKIEETFTVKHE-ETE-----EAFR 68

  Fly   131 VELVKDQEESD-TEIKREFVDEEEEEDDDDDDEFICEDVDVGDSEALYGKSSDGEDRPTKKRVKQ 194
            |:....:|::| ..:|:|..|:.|.|:.....:.        ..|....|:|  .:|..:|....
Zfish    69 VKHEDPEEQTDLMPLKKESQDQNEIEEKHQHKKI--------PEEREQRKTS--SERTAQKTESN 123

  Fly   195 ECTTCGKVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKS 259
            .|..|||.:.......||:......:| :.|..||.....::.|.:||.:|.|:....|.||.||
Zfish   124 TCHECGKSFTRKQSFTKHMRVHTGAKP-YTCSQCGKSFTWKQNLTMHMMIHTGEKPHACLYCEKS 187

  Fly   260 FSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFN 324
            |....:...||.:|...|.:.|.:||..|:....|..| :|....|.|..|..|..||...:::.
Zfish   188 FISKQSLTNHMEVHTGGKPHTCHQCGKSFTWKQYLTQH-MRIHTGEKPHSCQQCGKSFTWTQSYR 251

  Fly   325 HHTLIHKENRPRHYCSVCPKSFTERYTLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDES 389
            :|...|.:.|| :.|..|.|||..:..||.||..|.|:.:|.                       
Zfish   252 NHMRNHTKERP-YVCQQCGKSFIWKQNLKNHMNAHTGEKLYS----------------------- 292

  Fly   390 EAAVTVIMSDNDENSGFCLICNTNFENKKELEHHLQFDHDV 430
                             |..|..:|..|:.|..||:....|
Zfish   293 -----------------CQYCGKSFTWKQSLTDHLKIHSGV 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 47/154 (31%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..327 CDD:275370 4/16 (25%)
zf-C2H2 337..359 CDD:278523 9/21 (43%)
C2H2 Zn finger 339..359 CDD:275368 9/19 (47%)
LOC101882575XP_021326494.1 COG5048 <74..272 CDD:227381 57/210 (27%)
C2H2 Zn finger 125..145 CDD:275368 6/19 (32%)
C2H2 Zn finger 153..173 CDD:275368 6/19 (32%)
C2H2 Zn finger 181..201 CDD:275368 8/19 (42%)
C2H2 Zn finger 209..229 CDD:275368 7/20 (35%)
C2H2 Zn finger 237..257 CDD:275368 5/19 (26%)
C2H2 Zn finger 265..285 CDD:275368 9/19 (47%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
C2H2 Zn finger 321..341 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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