DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and znf1070

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001108190.1 Gene:znf1070 / 100137121 ZFINID:ZDB-GENE-080212-4 Length:363 Species:Danio rerio


Alignment Length:328 Identity:86/328 - (26%)
Similarity:138/328 - (42%) Gaps:36/328 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VPESGEDILVEEV-EIPQSDVETDADAEADALFVELVKDQEESDTEIKREFVDEEEEEDDDDDDE 162
            :.|..||:.:||. .:.|.|::...|       :.::|:      |...:.|.||:::.:..   
Zfish     4 IKEESEDVKIEETFTVKQEDLQKQTD-------LMVLKE------ETLHQNVMEEKQQFEKH--- 52

  Fly   163 FICEDVDVGDSEALYGK-SSDGEDRPTKKRVKQECTTCGKVYNSWYQLQKHISEEHSKQPNHICP 226
               :|:...:...|..| ||.|..|.:|......|..|.|.::...:|..|:......:| :.|.
Zfish    53 ---QDITTDEKPTLTKKTSSRGRPRKSKSGCNFSCKQCRKSFSQKPKLDVHMRVHTGGKP-YTCE 113

  Fly   227 ICGVIRRDEEYLELHMNLHEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQD 291
            .||.....::..:.||.:|.|:....|:.|.|.|:...|...|.|:|..::||.|::||..|...
Zfish   114 QCGKSFSQKQSFKTHMRIHTGERPYTCQQCGKRFNHVGNFAAHKRIHTGERKYTCQQCGKSFYNT 178

  Fly   292 NLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYTLKMHM 356
            ..|..|...|..|| |..||.|..|||...|...|...|...| |..|:.|.|||:::..|.:||
Zfish   179 GNLAVHMRIHTGEE-PYSCSQCGKSFKQNVTLKIHMRTHTGER-RFTCTQCGKSFSQKQDLGIHM 241

  Fly   357 KTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVTVIMSDNDENSGFCLICNTNFENKKELE 421
            :.|.|:..|...|.......:...:.|            ::|...|....|:.|..:|..|..|.
Zfish   242 RIHTGEKPYKCTECGKGFPYKSTLKHH------------MISHTGEKPFACVQCGKSFTTKANLM 294

  Fly   422 HHL 424
            :|:
Zfish   295 NHM 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 49/154 (32%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..327 CDD:275370 7/16 (44%)
zf-C2H2 337..359 CDD:278523 8/21 (38%)
C2H2 Zn finger 339..359 CDD:275368 8/19 (42%)
znf1070NP_001108190.1 C2H2 Zn finger 84..104 CDD:275368 5/19 (26%)
COG5048 <88..329 CDD:227381 63/225 (28%)
C2H2 Zn finger 112..132 CDD:275368 5/19 (26%)
C2H2 Zn finger 140..160 CDD:275368 7/19 (37%)
C2H2 Zn finger 168..188 CDD:275368 6/19 (32%)
C2H2 Zn finger 196..216 CDD:275368 8/19 (42%)
C2H2 Zn finger 224..244 CDD:275368 8/19 (42%)
C2H2 Zn finger 252..272 CDD:275368 2/31 (6%)
C2H2 Zn finger 280..300 CDD:275368 6/18 (33%)
C2H2 Zn finger 308..328 CDD:275368
C2H2 Zn finger 335..355 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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