DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-delta and zgc:173714

DIOPT Version :9

Sequence 1:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001103310.1 Gene:zgc:173714 / 100126112 ZFINID:ZDB-GENE-071004-90 Length:359 Species:Danio rerio


Alignment Length:371 Identity:88/371 - (23%)
Similarity:144/371 - (38%) Gaps:79/371 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 EDILVEEV-EIPQSDVETDADAEADALFVELVKDQEESDTEIKREFVDEEEEEDDDDDDE----- 162
            ||:.:||. .:.|.|::...|       :.::|::.....||      ||:.:|...|::     
Zfish     9 EDVKIEETFTVKQEDLQEQTD-------LMVLKEETHQWNEI------EEKHQDITTDEKPTLTK 60

  Fly   163 --FICEDVDVGDSEALY-GKSS----------DGEDRPTKKRVKQECTTCGKVYNSWYQ------ 208
              ..|.......|:..: ||.|          |...|..|.:....|..|||   |:|:      
Zfish    61 MTSSCRRPRKSKSKCNFSGKQSRKSFSQKPKLDVHMRVHKGKKTCTCKQCGK---SFYKTSSLTM 122

  Fly   209 -LQKHISEE-----------------------HSKQPNHICPICGVIRRDEEYLELHMNLHEGKT 249
             ::.|..|:                       |:.:..:.|..||.....:|..:.||..|.|:.
Zfish   123 YMRIHTGEKPYTCKQCGKSFCNTTNLTMHMRIHTGEKPYTCGQCGKSFCQKENFKTHMRTHTGER 187

  Fly   250 EKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLRHEAEENPIICSICN 314
            ...|:.|.|||....|...|||:|..::.|.|::||..|.....|..|...|..|: |..|:.|.
Zfish   188 PYTCQQCGKSFRHAGNFTVHMRIHTGERSYTCQQCGKGFYHAGSLAVHMKVHTGEK-PYTCTECG 251

  Fly   315 VSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYTLKMHMKTHEGDVVYGVREEAPADEQQVV 379
            .||..:.:.|||...|...:| ..|:.|.||||.:.:|..|:..|.|.:|:            ..
Zfish   252 KSFPHKSSINHHMRTHTGEKP-FACAQCGKSFTTKSSLMNHLNGHTGTIVF------------TC 303

  Fly   380 EELHVDVDESEAAVTVIMSDNDENSGFCLICNTNFENKKELEHHLQ 425
            ::..:.:...:.....:.:.:.||...|..|...|.:|:.|..||:
Zfish   304 DQCGIKLTRKDYIRRHMKTHSRENRFRCSECGKGFTHKRSLSAHLK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 50/184 (27%)
C2H2 Zn finger 225..245 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..273 CDD:275368 9/19 (47%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..327 CDD:275370 6/16 (38%)
zf-C2H2 337..359 CDD:278523 8/21 (38%)
C2H2 Zn finger 339..359 CDD:275368 8/19 (42%)
zgc:173714NP_001103310.1 COG5048 <41..336 CDD:227381 75/317 (24%)
C2H2 Zn finger 107..127 CDD:275368 6/22 (27%)
zf-H2C2_2 119..142 CDD:290200 2/22 (9%)
C2H2 Zn finger 135..155 CDD:275368 0/19 (0%)
zf-H2C2_2 147..170 CDD:290200 4/22 (18%)
C2H2 Zn finger 163..183 CDD:275368 6/19 (32%)
zf-H2C2_2 175..200 CDD:290200 9/24 (38%)
C2H2 Zn finger 191..211 CDD:275368 9/19 (47%)
C2H2 Zn finger 219..239 CDD:275368 6/19 (32%)
zf-H2C2_2 231..254 CDD:290200 7/23 (30%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
zf-H2C2_2 263..284 CDD:290200 8/21 (38%)
C2H2 Zn finger 275..295 CDD:275368 8/19 (42%)
C2H2 Zn finger 331..351 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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