DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sry-beta and ZNF30

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001092907.1 Gene:ZNF30 / 90075 HGNCID:13090 Length:624 Species:Homo sapiens


Alignment Length:277 Identity:75/277 - (27%)
Similarity:115/277 - (41%) Gaps:42/277 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 QIADALLGCRQVEGKAETKQQAAKRARVQVPAFKIVQATALKEPERQPGEEDECEEFMKEEMLDE 146
            |:.|..:||:::    .|.:..        |:|.:.|..:.::|.       ||:|:.|      
Human    89 QLEDDTIGCKEM----PTSENC--------PSFALHQKISRQKPR-------ECQEYGK------ 128

  Fly   147 EFQFSEPDDSMPSSEEEFFTETTEIPCHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVK 211
                :...||.|...|...:......|..||:.||:...|..|.:....:|..:  ...||....
Human   129 ----TLCQDSKPVQHERIHSSEKPNRCKECGKNFSNGHQLTIHQRLHVGEKPYK--YEKCGKAFI 187

  Fly   212 DDEVLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHL 276
            .......|..:|.|:..|:|:.|.|..|....:..|..:|..||.|:|.:||:.|    |:|..|
Human   188 SGSAFVKHGRIHTGEKPLKCKQCGKTISGSYQLTVHKSIHTGKKPYECGECGKAF----LVYGKL 248

  Fly   277 MRHDAE---ENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQ 338
            .||.:.   |....||.|.:.|.|......|.|.|.:::| |.|.:|.|:|.....|..|:|:|.
Human   249 TRHQSTHTGEKPFGCEECGKAFSTFSYLVQHQRIHTSEKP-YECKECGKAFSTSSPLAKHQRIHT 312

  Fly   339 PVEKPESAEAKEATVTF 355
            . |||  .|.||...:|
Human   313 G-EKP--YECKECGKSF 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 3/19 (16%)
C2H2 Zn finger 231..251 CDD:275368 5/19 (26%)
C2H2 Zn finger 259..308 CDD:275368 17/51 (33%)
C2H2 Zn finger 288..303 CDD:275370 5/14 (36%)
zf-C2H2 315..337 CDD:278523 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
ZNF30NP_001092907.1 KRAB 14..75 CDD:214630
KRAB 14..53 CDD:279668
COG5048 <97..302 CDD:227381 61/240 (25%)
C2H2 Zn finger 123..143 CDD:275368 7/29 (24%)
C2H2 Zn finger 151..171 CDD:275368 7/19 (37%)
C2H2 Zn finger 179..199 CDD:275368 3/19 (16%)
C2H2 Zn finger 207..227 CDD:275368 5/19 (26%)
C2H2 Zn finger 235..255 CDD:275368 9/23 (39%)
COG5048 245..624 CDD:227381 30/86 (35%)
C2H2 Zn finger 263..283 CDD:275368 7/19 (37%)
zf-H2C2_2 275..300 CDD:290200 9/25 (36%)
C2H2 Zn finger 291..311 CDD:275368 7/19 (37%)
zf-H2C2_2 304..327 CDD:290200 11/26 (42%)
C2H2 Zn finger 319..339 CDD:275368 3/8 (38%)
zf-H2C2_2 332..354 CDD:290200
C2H2 Zn finger 347..367 CDD:275368
C2H2 Zn finger 375..395 CDD:275368
C2H2 Zn finger 403..423 CDD:275368
zf-H2C2_2 415..438 CDD:290200
C2H2 Zn finger 431..451 CDD:275368
zf-H2C2_2 444..466 CDD:290200
C2H2 Zn finger 459..479 CDD:275368
zf-H2C2_2 471..496 CDD:290200
C2H2 Zn finger 487..507 CDD:275368
zf-H2C2_2 499..524 CDD:290200
C2H2 Zn finger 515..535 CDD:275368
zf-H2C2_2 527..551 CDD:290200
C2H2 Zn finger 543..563 CDD:275368
C2H2 Zn finger 571..591 CDD:275368
zf-H2C2_2 584..608 CDD:290200
C2H2 Zn finger 599..619 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.