DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and zgc:171551

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001107110.1 Gene:zgc:171551 / 798325 ZFINID:ZDB-GENE-080220-8 Length:443 Species:Danio rerio


Alignment Length:294 Identity:80/294 - (27%)
Similarity:127/294 - (43%) Gaps:49/294 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 QVEGKAETKQQAAKRARVQVPAFKIVQATALKEPERQPGEEDECEEFMKEEMLDEEFQFSEPDDS 156
            ::|.....||:..::..:.|...:..:...::|.|....:| |.:||.:   ::|:.||.:..|.
Zfish    12 KIEDTFTVKQEDPEQTELMVLKEETEELNGIEEKEPMVLKE-ETQEFNE---MEEKDQFEKNQDL 72

  Fly   157 M------------PSSEEEFFTETTEIPCHICGEMFSSQEVLERHIKADT---------C----- 195
            |            |...::.........|..||:.|:.:..|..||:..|         |     
Zfish    73 MTAEMSTMTKKTSPRKRDQEIKPVGNFTCSQCGKSFTQKYKLRVHIRVHTGEKPYSCEQCGKRFI 137

  Fly   196 QKSEQA------------TCNVCGLKVKDDEVLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHM 248
            :||:.|            :|..||...|..:.|.:||..|.|:....|..||..||....:..||
Zfish   138 EKSKLASHMSTHTDVRPHSCPECGKGFKQKQNLAIHMRTHTGEKPFSCDQCDMSFSQAHYLKAHM 202

  Fly   249 EVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRTYKHHLRTH----Q 309
            .||.::|.|.|.:||:||....::.||:..|..|: ...|..|..:|..|:..:.|::.|    :
Zfish   203 NVHSNEKPYACQQCGKRFRQIKILRNHIKLHTGEK-PCACPQCGMRFIHKQRIETHMKVHNKAIE 266

  Fly   310 TDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKP 343
            ..:| :.|..|.|.||.|.|||:|.|||.. |||
Zfish   267 AIKP-FLCQQCGKGFVQKGTLKIHMRVHTG-EKP 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 7/19 (37%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
C2H2 Zn finger 259..308 CDD:275368 14/48 (29%)
C2H2 Zn finger 288..303 CDD:275370 4/14 (29%)
zf-C2H2 315..337 CDD:278523 11/21 (52%)
C2H2 Zn finger 317..337 CDD:275368 11/19 (58%)
zgc:171551NP_001107110.1 COG5048 66..>439 CDD:227381 68/236 (29%)
zf-C2H2 99..121 CDD:278523 7/21 (33%)
C2H2 Zn finger 101..121 CDD:275368 7/19 (37%)
zf-H2C2_2 114..136 CDD:290200 5/21 (24%)
C2H2 Zn finger 129..149 CDD:275368 4/19 (21%)
zf-C2H2 155..177 CDD:278523 7/21 (33%)
C2H2 Zn finger 157..177 CDD:275368 7/19 (37%)
zf-H2C2_2 169..194 CDD:290200 9/24 (38%)
C2H2 Zn finger 185..205 CDD:275368 7/19 (37%)
zf-H2C2_2 197..222 CDD:290200 11/24 (46%)
C2H2 Zn finger 213..233 CDD:275368 7/19 (37%)
C2H2 Zn finger 241..261 CDD:275368 5/19 (26%)
C2H2 Zn finger 273..293 CDD:275368 11/19 (58%)
zf-H2C2_2 286..310 CDD:290200 9/14 (64%)
C2H2 Zn finger 301..321 CDD:275368
zf-H2C2_2 313..338 CDD:290200
C2H2 Zn finger 329..349 CDD:275368
zf-H2C2_2 342..366 CDD:290200
zf-C2H2 355..377 CDD:278523
C2H2 Zn finger 357..377 CDD:275368
C2H2 Zn finger 385..405 CDD:275368
zf-H2C2_2 398..422 CDD:290200
C2H2 Zn finger 413..433 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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