DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and ZNF142

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001353219.1 Gene:ZNF142 / 7701 HGNCID:12927 Length:1887 Species:Homo sapiens


Alignment Length:193 Identity:58/193 - (30%)
Similarity:89/193 - (46%) Gaps:16/193 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 TTEIP--CHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEGKTEL- 229
            |.|.|  ||:|....:....|:.|::..  ::..:..|..||.|.|....|..||..|.|.... 
Human  1675 TGEKPYHCHLCPYACADPSRLKYHMRIH--KEERKYLCPECGYKCKWVNQLKYHMTKHTGLKPYQ 1737

  Fly   230 --ECRYCDKKFSHKRNVLR-HMEV-HWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEV 290
              ||.||    :::.:.|| |.|. |.:.:.:.|::||:.|...:|:..||.:| :|....:|.|
Human  1738 CPECEYC----TNRADALRVHQETRHREARAFMCEQCGKAFKTRFLLRTHLRKH-SEAKPYVCNV 1797

  Fly   291 CHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVE-KPESAEAKEAT 352
            ||:.|:.....:||..|| |||..:.|..|......|:.:..|.|.|.|.: .|.....|:.|
Human  1798 CHRAFRWAAGLRHHALTH-TDRHPFFCRLCNYKAKQKFQVVKHVRRHHPDQADPNQGVGKDPT 1859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 8/19 (42%)
C2H2 Zn finger 231..251 CDD:275368 7/21 (33%)
C2H2 Zn finger 259..308 CDD:275368 16/48 (33%)
C2H2 Zn finger 288..303 CDD:275370 5/14 (36%)
zf-C2H2 315..337 CDD:278523 5/21 (24%)
C2H2 Zn finger 317..337 CDD:275368 5/19 (26%)
ZNF142NP_001353219.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
C2H2 Zn finger 365..385 CDD:275368
C2H2 Zn finger 393..413 CDD:275368
C2H2 Zn finger 421..438 CDD:275368
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 545..566 CDD:275368
C2H2 Zn finger 574..595 CDD:275368
zf-H2C2_5 601..625 CDD:404746
C2H2 Zn finger 603..623 CDD:275368
C2H2 Zn finger 631..651 CDD:275368
C2H2 Zn finger 659..679 CDD:275368
C2H2 Zn finger 687..707 CDD:275368
C2H2 Zn finger 714..731 CDD:275368
PHA03247 928..>1219 CDD:223021
C2H2 Zn finger 1306..1353 CDD:275368
C2H2 Zn finger 1373..1394 CDD:275368
C2H2 Zn finger 1402..1422 CDD:275368
C2H2 Zn finger 1430..1451 CDD:275368
C2H2 Zn finger 1626..1646 CDD:275368
C2H2 Zn finger 1654..1674 CDD:275368
C2H2 Zn finger 1682..1702 CDD:275368 5/19 (26%)
C2H2 Zn finger 1710..1730 CDD:275368 8/19 (42%)
zf-H2C2_2 1723..1747 CDD:404364 9/27 (33%)
C2H2 Zn finger 1738..1759 CDD:275368 8/24 (33%)
C2H2 Zn finger 1767..1787 CDD:275368 7/19 (37%)
C2H2 Zn finger 1795..1815 CDD:275368 7/19 (37%)
C2H2 Zn finger 1823..1843 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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