DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sry-beta and ZNF182

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001171570.1 Gene:ZNF182 / 7569 HGNCID:13001 Length:639 Species:Homo sapiens


Alignment Length:322 Identity:88/322 - (27%)
Similarity:134/322 - (41%) Gaps:39/322 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 ACRDCLEYLFNYDRLVRNL-SQVQRQIADALLGCRQVE-------GKAETKQQAAKRARVQVPAF 114
            :.|||.|: .|...|..|| :.:||.......|...|:       ..||.|....        ..
Human   133 SARDCHEF-GNILHLSTNLVASIQRPDKHESFGNNMVDNLDLFSRSSAENKYDNG--------CA 188

  Fly   115 KIVQATALKE--PERQPGEEDECEEFMKEE---MLDEEFQFSEPDDSMPSSEEEFF--------- 165
            |:...|..::  |..:|....||.:.::.:   .|.:..:..|......:..:.|.         
Human   189 KLFFHTEYEKTNPGMKPYGYKECGKGLRRKKGLSLHQRIKNGEKPFECTACRKTFSKKSHLIVHW 253

  Fly   166 -TETTEIP--CHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEGKT 227
             |.|.|.|  |..||:.||.:..|..|::..|.::..:  |..||...::...:.:|...|.|:.
Human   254 RTHTGEKPFGCTECGKAFSQKSQLIIHLRTHTGERPFE--CPECGKAFREKSTVIIHYRTHTGEK 316

  Fly   228 ELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCH 292
            ..||..|.|.|:.|.|::.|.:.|..:|.|:|.||||.|.....:..|...|..:: ...|..|.
Human   317 PYECNECGKAFTQKSNLIVHQKTHTGEKTYECTKCGESFIQKLDLIIHHSTHTGKK-PHECNECK 380

  Fly   293 QQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKPESAEAKEATVT 354
            :.|..|.|...|.|||..::| :.|.:|.|||.:|.||.||:|.|.. |||...:....|.|
Human   381 KTFSDKSTLIIHQRTHTGEKP-HKCTECGKSFNEKSTLIVHQRTHTG-EKPYECDVCGKTFT 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 4/19 (21%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
C2H2 Zn finger 259..308 CDD:275368 15/48 (31%)
C2H2 Zn finger 288..303 CDD:275370 5/14 (36%)
zf-C2H2 315..337 CDD:278523 11/21 (52%)
C2H2 Zn finger 317..337 CDD:275368 11/19 (58%)
ZNF182NP_001171570.1 KRAB 27..85 CDD:214630
KRAB 27..66 CDD:279668
COG5048 147..553 CDD:227381 82/307 (27%)
C2H2 Zn finger 209..228 CDD:275368 3/18 (17%)
C2H2 Zn finger 236..256 CDD:275368 1/19 (5%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
zf-H2C2_2 277..299 CDD:290200 6/23 (26%)
C2H2 Zn finger 292..312 CDD:275368 4/19 (21%)
zf-H2C2_2 308..329 CDD:290200 8/20 (40%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
zf-H2C2_2 332..357 CDD:290200 11/24 (46%)
C2H2 Zn finger 348..368 CDD:275368 7/19 (37%)
zf-C2H2 374..396 CDD:278523 7/21 (33%)
C2H2 Zn finger 376..396 CDD:275368 7/19 (37%)
zf-H2C2_2 389..412 CDD:290200 9/23 (39%)
C2H2 Zn finger 404..424 CDD:275368 11/19 (58%)
zf-H2C2_2 417..441 CDD:290200 10/25 (40%)
C2H2 Zn finger 432..452 CDD:275368 2/9 (22%)
zf-H2C2_2 444..469 CDD:290200
C2H2 Zn finger 460..480 CDD:275368
zf-H2C2_2 472..497 CDD:290200
C2H2 Zn finger 488..508 CDD:275368
zf-H2C2_2 500..523 CDD:290200
C2H2 Zn finger 516..536 CDD:275368
zf-H2C2_2 529..553 CDD:290200
C2H2 Zn finger 544..564 CDD:275368
zf-H2C2_2 557..579 CDD:290200
C2H2 Zn finger 572..592 CDD:275368
zf-H2C2_2 587..609 CDD:290200
C2H2 Zn finger 600..620 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 619..639
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.