DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and Zfp661

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_011238089.1 Gene:Zfp661 / 72180 MGIID:1919430 Length:454 Species:Mus musculus


Alignment Length:287 Identity:78/287 - (27%)
Similarity:123/287 - (42%) Gaps:43/287 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 ETKQQAAKRARVQV-----------PAFKIVQATALKEPERQPGEEDECEEFMKEEMLDEEF-QF 150
            |||.:....:|..:           |..:|...|...|||::..:...|:   |...||:.. |.
Mouse   121 ETKPETLDASRGTLREIHRKQSSLCPKREIQTLTGGPEPEKESPKARTCK---KPLSLDKGLHQM 182

  Fly   151 SEP---------DDSMPSSEEEFF----------TETTEIP--CHICGEMFSSQEVLERHIKADT 194
            |.|         |.......:.||          |.|.|.|  |..||:.||.:..|.||:...|
Mouse   183 SAPSKKALTKHQDQECSECGKTFFDHSSLIRHQRTHTGEKPYDCPECGKAFSHRSSLSRHLMFHT 247

  Fly   195 CQKSEQATCNVCGLKVKDDEVLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKKYQC 259
            .:...:  |:.||....|...|.:|..:|.|:...:|..|.|.|..:.::.||..:|..:..|:|
Mouse   248 GESPYE--CDACGKAFFDRSSLTVHQRIHTGEKPFKCNDCGKAFFDRSSLTRHQRIHTGESPYEC 310

  Fly   260 DKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSF 324
            .:||:.||...::..||:.|...: ...|..|.:.|....:...|.:.| |:.|||.|.:|.|:|
Mouse   311 QQCGKAFSQKSILTRHLLTHTGRK-PYECRDCGKAFYGVTSLNRHQKVH-TEEPRYQCSECGKAF 373

  Fly   325 VDKYTLKVHKRVH---QPVEKPESAEA 348
            .|:.:|..|:::|   :|.|..|..:|
Mouse   374 FDRSSLTQHQKIHTGDKPYECGECGKA 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 6/19 (32%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..308 CDD:275368 12/48 (25%)
C2H2 Zn finger 288..303 CDD:275370 3/14 (21%)
zf-C2H2 315..337 CDD:278523 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
Zfp661XP_011238089.1 KRAB 51..101 CDD:214630
COG5048 180..>444 CDD:227381 64/225 (28%)
C2H2 Zn finger 198..218 CDD:275368 2/19 (11%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..330 CDD:275368 7/19 (37%)
C2H2 Zn finger 338..358 CDD:275368 4/19 (21%)
C2H2 Zn finger 366..386 CDD:275368 7/19 (37%)
C2H2 Zn finger 394..414 CDD:275368 2/7 (29%)
C2H2 Zn finger 422..440 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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