DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and znf1041

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001107903.1 Gene:znf1041 / 565096 ZFINID:ZDB-GENE-080213-11 Length:443 Species:Danio rerio


Alignment Length:271 Identity:65/271 - (23%)
Similarity:104/271 - (38%) Gaps:48/271 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 KIVQATALKEPERQPGEEDECEEFMKEEMLDEEFQFSEPDDSMPSSEEEFFTETT---------- 169
            ||.:...:||.:.|    ::.:..:.:|...:..:..|....|.:.|:...||.|          
Zfish    12 KIEETFTVKEEDLQ----EQTDPIVLKEETHQWNEMEEKHQDMTTDEKPTLTEKTSSQGRPRKSK 72

  Fly   170 ---EIPCHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEGKTELEC 231
               .:.|....:.||.:..|:.|::..|.:|  ...|..||......:...:||.:|.|:....|
Zfish    73 SRCNVSCKQSRKSFSQKPNLDVHMRVHTREK--PYNCEQCGKSFGQKQSFKIHMRIHTGERPYTC 135

  Fly   232 RYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAE-------------- 282
            :.|.:.|.|..|...|..:|..::.|.|.:||:.|.....:..|:..|..|              
Zfish   136 QQCGQSFYHAGNFAVHRRIHTGERPYTCQQCGQSFYTGGNLAVHMRIHTGEKPYSCIQCGKSFKQ 200

  Fly   283 -------------ENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHK 334
                         |....|::|.:.|.|...:..|:|.|..:|| |.|..|.|||.....|..|.
Zfish   201 NGTLKVHMRSHTGERPYTCQLCGKSFYTTGNFAQHMRIHTGERP-YTCQQCGKSFYQSANLAAHM 264

  Fly   335 RVHQPVEKPES 345
            |:|.. |||.|
Zfish   265 RIHTG-EKPYS 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..308 CDD:275368 14/75 (19%)
C2H2 Zn finger 288..303 CDD:275370 4/14 (29%)
zf-C2H2 315..337 CDD:278523 9/21 (43%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
znf1041NP_001107903.1 C2H2 Zn finger 79..99 CDD:275368 5/19 (26%)
zf-H2C2_2 91..114 CDD:290200 7/24 (29%)
COG5048 103..>429 CDD:227381 47/176 (27%)
C2H2 Zn finger 107..127 CDD:275368 5/19 (26%)
zf-H2C2_2 119..142 CDD:290200 6/22 (27%)
C2H2 Zn finger 135..155 CDD:275368 6/19 (32%)
C2H2 Zn finger 163..183 CDD:275368 5/19 (26%)
zf-H2C2_2 175..200 CDD:290200 3/24 (13%)
C2H2 Zn finger 191..211 CDD:275368 0/19 (0%)
zf-H2C2_2 204..228 CDD:290200 4/23 (17%)
C2H2 Zn finger 219..239 CDD:275368 6/19 (32%)
zf-H2C2_2 231..254 CDD:290200 9/23 (39%)
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
zf-H2C2_2 259..284 CDD:290200 8/17 (47%)
C2H2 Zn finger 275..295 CDD:275368 65/271 (24%)
C2H2 Zn finger 303..323 CDD:275368
zf-H2C2_2 315..340 CDD:290200
C2H2 Zn finger 331..351 CDD:275368
zf-H2C2_2 344..368 CDD:290200
C2H2 Zn finger 359..379 CDD:275368
C2H2 Zn finger 387..407 CDD:275368
zf-H2C2_2 399..424 CDD:290200
C2H2 Zn finger 415..435 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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