DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and znf711

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001352539.1 Gene:znf711 / 562505 ZFINID:ZDB-GENE-081107-49 Length:765 Species:Danio rerio


Alignment Length:310 Identity:73/310 - (23%)
Similarity:121/310 - (39%) Gaps:65/310 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 NLSQVQRQI-ADALLGCRQVEGKAETKQQAAKRARVQVPAF------------------------ 114
            |.|::..|: .:.::|..:.....|.:.:.:...:..|||.                        
Zfish   280 NCSEMTDQVYMEVIVGEEEAPAITEAQMEDSPVNKTIVPAAWATAYGSSLESKNGAATPYLQITD 344

  Fly   115 KIVQATALKE--PERQPGEEDECEEFMKEEMLDEEFQFSEPDDSMPSSEEEFFTETTEIPCHICG 177
            .|..:.|||:  .:|:.||..:|:..|       .|......|..|         .|..||||||
Zfish   345 SISTSRALKQKIKKRRRGETRQCQTGM-------SFSVIIGPDGQP---------LTVYPCHICG 393

  Fly   178 EMFSSQEVLERHIK--ADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEGK-----------TEL 229
            :.|.|:..|:||:|  .|...| ::..|..|  :...::.:..|.:|...|           ||.
Zfish   394 KKFKSRGFLKRHMKNHPDHMFK-KKYQCTDC--EFTTNKKVSFHNHLESHKLIIKNEKIPEYTEY 455

  Fly   230 ECRYCD-KKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQ 293
            ..||.: ...|..:.:||..|    .|.::|..|....:...|:..||:...::..|.:|..|.:
Zfish   456 TRRYHEASPLSSNKLILRDKE----PKLHKCKYCEYETAEQGLLNRHLLAVHSKNFAHVCVECAK 516

  Fly   294 QFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKP 343
            .|:.....|.|:|||..::| :.|..||.|..|:..||.|.:.....:.|
Zfish   517 GFRHPSELKKHMRTHTGEKP-FHCQHCEFSCADQSNLKTHIKSKHGTDLP 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 3/19 (16%)
C2H2 Zn finger 231..251 CDD:275368 6/20 (30%)
C2H2 Zn finger 259..308 CDD:275368 12/48 (25%)
C2H2 Zn finger 288..303 CDD:275370 3/14 (21%)
zf-C2H2 315..337 CDD:278523 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
znf711NP_001352539.1 Zfx_Zfy_act 64..368 CDD:309717 15/87 (17%)
COG5048 385..763 CDD:227381 53/189 (28%)
C2H2 Zn finger 389..409 CDD:275368 11/19 (58%)
C2H2 Zn finger 482..503 CDD:275368 5/20 (25%)
C2H2 Zn finger 511..531 CDD:275368 6/19 (32%)
C2H2 Zn finger 539..560 CDD:275368 8/20 (40%)
C2H2 Zn finger 568..584 CDD:275368
C2H2 Zn finger 596..617 CDD:275368
C2H2 Zn finger 625..645 CDD:275368
C2H2 Zn finger 682..702 CDD:275368
C2H2 Zn finger 710..731 CDD:275368
C2H2 Zn finger 739..759 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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