DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and drll.2

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001159918.1 Gene:drll.2 / 555524 ZFINID:ZDB-GENE-060531-125 Length:411 Species:Danio rerio


Alignment Length:256 Identity:72/256 - (28%)
Similarity:115/256 - (44%) Gaps:49/256 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 QVEG--KAETKQQAAKRARVQVPAFKIVQATALKEPERQPGEEDECEEFMKEEMLDEEFQFSEPD 154
            ::||  |.|||.:.:.|.::...:|            |..|:       :|:.||          
Zfish    21 RMEGNKKGETKAKKSVRKKISGKSF------------RSKGD-------VKKHML---------- 56

  Fly   155 DSMPSSEEEFFTETTEIP--CHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLD 217
                       ..|.|.|  |..||:.|..::..:.|:  |...|....||:.||...|....|.
Zfish    57 -----------IHTGEKPYRCDQCGKFFPYKQRFKLHL--DIHAKGNPYTCDECGESFKTRLQLR 108

  Fly   218 LHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAE 282
            .||.||......:|..|:|.:..:.::.|||::|..:|.::|:.||:.|.:..|:.:|||.| :|
Zfish   109 SHMTLHPKYKPYKCDQCEKSYGREDHLQRHMKLHTGEKPHKCEHCGKSFPMRDLLRSHLMVH-SE 172

  Fly   283 ENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKP 343
            .....|:.|.:.|..|::|..|:..|..:|| |.|..|.|.|..:.:|.:|.|.|:. |||
Zfish   173 VKPYTCDQCGKGFTLKKSYNEHMNIHTGERP-YTCDQCGKGFPYEQSLNLHMRFHRE-EKP 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 7/19 (37%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..308 CDD:275368 16/48 (33%)
C2H2 Zn finger 288..303 CDD:275370 5/14 (36%)
zf-C2H2 315..337 CDD:278523 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
drll.2NP_001159918.1 C2H2 Zn finger 42..58 CDD:275368 6/55 (11%)
zf-H2C2_2 50..73 CDD:290200 9/50 (18%)
COG5048 62..408 CDD:227381 57/175 (33%)
C2H2 Zn finger 66..86 CDD:275368 6/21 (29%)
C2H2 Zn finger 94..114 CDD:275368 7/19 (37%)
C2H2 Zn finger 122..142 CDD:275368 6/19 (32%)
zf-H2C2_2 134..157 CDD:290200 8/22 (36%)
C2H2 Zn finger 150..170 CDD:275368 8/19 (42%)
C2H2 Zn finger 178..198 CDD:275368 6/19 (32%)
C2H2 Zn finger 206..226 CDD:275368 7/19 (37%)
C2H2 Zn finger 234..254 CDD:275368
C2H2 Zn finger 262..282 CDD:275368
C2H2 Zn finger 290..310 CDD:275368
C2H2 Zn finger 318..338 CDD:275368
C2H2 Zn finger 346..366 CDD:275368
C2H2 Zn finger 374..394 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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