DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and znf989

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001018578.1 Gene:znf989 / 553777 ZFINID:ZDB-GENE-050522-337 Length:381 Species:Danio rerio


Alignment Length:274 Identity:73/274 - (26%)
Similarity:114/274 - (41%) Gaps:59/274 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 KIVQATALK--EPERQPGEEDECEEFMKEEMLDEEFQ-FSEPDDSMPSSEEEFFTETTEIP---- 172
            ||....::|  :||.|       .|.|   :|.|||| .:|.::|.....::..|:....|    
Zfish    12 KIEDTFSVKHEDPEEQ-------TELM---VLKEEFQDLNEMEESQCERHQDLTTDEKSTPKKSL 66

  Fly   173 -----------CHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEGK 226
                       |.:||:.||.:..|:.|::..|..|  ..||:.||........:|:||.:|..:
Zfish    67 PHKRVQKNNFTCCVCGKCFSQRHSLKVHMRIHTGDK--LFTCDQCGKSFTQKSKIDVHMRVHTSE 129

  Fly   227 TELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAE--------- 282
            ....|..|.|.|..|:::..||.:|..:|.:.|::||:||:....:.:|...|..|         
Zfish   130 RHYSCPQCAKGFRQKQHLKLHMRIHSGEKPFPCNQCGKRFNQLQALQSHFTIHSGERPYACTQCE 194

  Fly   283 ------------------ENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYT 329
                              |....|..|...|..|...::|:|.|..::| :.||.|||:|..:..
Zfish   195 KSFRQRPSLEKHLKVHSREKPFTCSQCGNGFTQKERLQNHMRIHTGEKP-FACPHCEKTFAHRSN 258

  Fly   330 LKVHKRVHQPVEKP 343
            |..|.|.|.. |||
Zfish   259 LYFHVRTHSG-EKP 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 6/19 (32%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
C2H2 Zn finger 259..308 CDD:275368 15/75 (20%)
C2H2 Zn finger 288..303 CDD:275370 4/14 (29%)
zf-C2H2 315..337 CDD:278523 9/21 (43%)
C2H2 Zn finger 317..337 CDD:275368 9/19 (47%)
znf989NP_001018578.1 C2H2 Zn finger 78..98 CDD:275368 7/19 (37%)
zf-H2C2_2 90..115 CDD:290200 8/26 (31%)
C2H2 Zn finger 106..126 CDD:275368 6/19 (32%)
C2H2 Zn finger 134..154 CDD:275368 7/19 (37%)
zf-H2C2_2 146..171 CDD:290200 9/24 (38%)
COG5048 <149..377 CDD:227381 34/125 (27%)
C2H2 Zn finger 162..182 CDD:275368 6/19 (32%)
C2H2 Zn finger 190..210 CDD:275368 0/19 (0%)
C2H2 Zn finger 218..238 CDD:275368 6/19 (32%)
zf-H2C2_2 231..255 CDD:290200 10/24 (42%)
C2H2 Zn finger 246..266 CDD:275368 9/19 (47%)
zf-H2C2_2 258..283 CDD:290200 7/15 (47%)
C2H2 Zn finger 274..294 CDD:275368
zf-H2C2_2 290..311 CDD:290200
C2H2 Zn finger 302..322 CDD:275368
zf-H2C2_2 314..339 CDD:290200
C2H2 Zn finger 330..350 CDD:275368
C2H2 Zn finger 356..376 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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