DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and D19A

DIOPT Version :10

Sequence 1:NP_524579.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster


Alignment Length:399 Identity:87/399 - (21%)
Similarity:128/399 - (32%) Gaps:133/399 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 NYDRLVRNLSQVQRQIADALLGCRQVEGKAETKQQAAK-----RARVQVPAF------------- 114
            |||.|:.:..::.....|.......|:.:||..::.||     ...|.|..|             
  Fly   117 NYDPLLNHKMELIENEEDVFKMLEHVDKEAEEVEKEAKVEEDDGGNVSVKMFDDDSSIESGNDND 181

  Fly   115 ------------KIVQATALKEPERQPG-EEDECEEFMK-------------------EEMLDEE 147
                        .|..|..::.|....| ::|......|                   ||:.|..
  Fly   182 HDLDFEPNSSDDDIPLAQRMRGPATGSGPQQDRFSNLDKPKPRPRGRPKKIKPPPPEEEELSDSS 246

  Fly   148 FQFSEPDDSMPSSEEEFFTETTEIP-----------CHICGEMFSSQEVLERHI----------- 190
               ||.|||...:......:...||           ||||.:.|......|.|:           
  Fly   247 ---SESDDSEDGTSRGDKPKRKRIPIEERHLHRIIDCHICHQKFKKAIRYEEHMKYHNDLLPFQC 308

  Fly   191 KADTCQK-------------------SEQATC--NVCGLKVKDDEVLDLHMNLHEGKT------- 227
            |.:||:|                   ||...|  ..||.......:|..||....|.|       
  Fly   309 KVETCKKGFTTANGLRIHIDHAHTELSEVHACIAEGCGKTFPRVRLLTFHMKKVHGITKAAAPLR 373

  Fly   228 ELECRYCDKKFSHKRNVLRHMEVH-WDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVC 291
            :..|..||..|.....:.:||..| .::..|.|:.||:||.::..:.:|||||...:|. :|..|
  Fly   374 DFPCTECDTVFRCPTALKKHMYKHTGEELPYPCNICGKRFVINSALRDHLMRHAGIKNH-VCPYC 437

  Fly   292 HQQFKTKRTYKHHLRTH---------QTD-------------------RPRYPCPDCEKSFVDKY 328
            .....|::.:..|:.||         |.|                   |..:.|..|.|:|...:
  Fly   438 GVGKTTRQEWNAHILTHTKEKKFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFGKSH 502

  Fly   329 TLKVHKRVH 337
            ..|||:|.|
  Fly   503 ACKVHERSH 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_524579.1 C2H2 Zn finger 203..223 CDD:275368 6/21 (29%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..308 CDD:275368 15/48 (31%)
C2H2 Zn finger 288..303 CDD:275370 3/14 (21%)
zf-C2H2 315..337 CDD:395048 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
D19ANP_477304.1 zf-AD 12..83 CDD:214871
SFP1 <291..363 CDD:227516 14/71 (20%)
C2H2 Zn finger 343..362 CDD:275368 5/18 (28%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
zf-H2C2_2 389..414 CDD:463886 8/24 (33%)
C2H2 Zn finger 406..426 CDD:275368 8/19 (42%)
C2H2 Zn finger 434..454 CDD:275368 4/19 (21%)
C2H2 Zn finger 462..483 CDD:275368 2/20 (10%)
C2H2 Zn finger 491..511 CDD:275368 8/19 (42%)
C2H2 Zn finger 519..539 CDD:275368
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-C2H2 707..729 CDD:395048
C2H2 Zn finger 709..729 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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