DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and D19B

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster


Alignment Length:369 Identity:78/369 - (21%)
Similarity:142/369 - (38%) Gaps:100/369 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 YFEKIINQRLELLPNSAACRDCLEYLFNYDRLVRNLSQVQRQIADALLGCRQVEGKAETKQ---- 101
            :|:.::|.::|::.|.             :.:.:.|..|::::.:..:...|..|:.....    
  Fly   117 HFDPLLNSKIEIIENE-------------EDVFKMLESVEKEVEEVEMEMEQPFGRVSQDDSFES 168

  Fly   102 ---------------------QAAKRARVQVPAFKIVQATALKEPERQPGEEDECEEFMKEEMLD 145
                                 |.::|...:....|....:|.|   ||..|.:|.||....:..|
  Fly   169 GNDNDLDADFQISSDDDIPLAQRSRRGATRGSKAKGKPKSAAK---RQEEESEESEETSSSDDSD 230

  Fly   146 EEFQFSEPDDS-----MPSSEEEFFTETTEIPCHICGEMFSSQEVLERHIK-----------ADT 194
                 ..|.|.     :|::|.:   ....|.||||.:.|......|.|:|           .::
  Fly   231 -----GNPKDKPKRKRIPATERD---RHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTVES 287

  Fly   195 CQKSEQATCNVCGLKVKDDE------------------------VLDLHM-NLHEGKT---ELEC 231
            |:|. ..|.|  ||:|..:.                        :|..|| .:|:..|   :..|
  Fly   288 CRKG-FTTAN--GLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQRDFPC 349

  Fly   232 RYCDKKFSHKRNVLRHMEVH-WDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQF 295
            ..|:|.|.....:.:||..| .::..:.|:.||:||.::.::.:||:||...:|. :|..|....
  Fly   350 TECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHLLRHAGIKNH-VCPYCGVGK 413

  Fly   296 KTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVH-KRVHQ 338
            .|::.:..|:.|| |...:|.|..|:.:..:|..|..| |.||:
  Fly   414 TTRQEWNKHILTH-TKEKKYECRQCDHASHNKQALANHVKVVHE 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 7/44 (16%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..308 CDD:275368 14/48 (29%)
C2H2 Zn finger 288..303 CDD:275370 3/14 (21%)
zf-C2H2 315..337 CDD:278523 7/22 (32%)
C2H2 Zn finger 317..337 CDD:275368 6/20 (30%)
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 8/19 (42%)
C2H2 Zn finger 283..335 CDD:275368 9/54 (17%)
C2H2 Zn finger 318..338 CDD:275368 3/19 (16%)
COG5048 <347..512 CDD:227381 33/112 (29%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 4/19 (21%)
C2H2 Zn finger 434..455 CDD:275368 6/20 (30%)
C2H2 Zn finger 463..483 CDD:275368
C2H2 Zn finger 491..511 CDD:275368
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:290200
C2H2 Zn finger 643..663 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449770
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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