DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and CG31612

DIOPT Version :10

Sequence 1:NP_524579.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_724363.1 Gene:CG31612 / 35427 FlyBaseID:FBgn0051612 Length:987 Species:Drosophila melanogaster


Alignment Length:300 Identity:67/300 - (22%)
Similarity:121/300 - (40%) Gaps:53/300 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LVRNLSQVQRQIADALLGCRQVEGKAETKQQAAKRARVQVPAFKI-------VQATALKEPERQP 129
            |.|....:.|...|..|..|:.......||:|..:..:..|..:|       ::.|....|.::.
  Fly   555 LARYFCAICRLEFDNSLDARRHRSLVIHKQKARPQTSIPQPENEIEHMLREVLEETVPSPPAKRS 619

  Fly   130 GEED-ECEEFMKEEMLDEEFQFSEPDDSMPSSEEEFFTETTEIPCHICGEMFSSQEVLERHIKA- 192
            .:.: :|....|  .::...:.::....:.||:...        |..||..|.|.:.|.||.:: 
  Fly   620 ADVNAKCSNSRK--TIESSQRLAQHQAEVHSSDNHL--------CLSCGISFESAQALGRHTRSC 674

  Fly   193 ------------DTCQKSEQATCNVCGLKVKDDEVLDLHMNLHE-----GKTE-LECRYCDKKFS 239
                        ...||....:|:.|..:.:.:..|..|...|.     ||.| |:|..|.|.| 
  Fly   675 QPLASTSTPADLSQAQKKSMYSCDQCRFQSQYESDLVYHRIFHTRSGTIGKNEVLQCPLCPKNF- 738

  Fly   240 HKRNVLR-HMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRTYKH 303
             |::.|| |:..|.::|.::|.:|.::|:....:.||::..            |.:...|...|:
  Fly   739 -KKHSLRAHLRNHTNEKIFECTECLQKFARRHNLKNHVITK------------HAKVGDKEKKKY 790

  Fly   304 HLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVH-QPVEK 342
            ..:..:..:|:|.|..|.|....||:||:|:..| :.||:
  Fly   791 AAKDVEQSKPKYQCGTCGKLLAKKYSLKLHEISHSKAVER 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_524579.1 C2H2 Zn finger 203..223 CDD:275368 4/19 (21%)
C2H2 Zn finger 231..251 CDD:275368 8/20 (40%)
C2H2 Zn finger 259..308 CDD:275368 8/48 (17%)
C2H2 Zn finger 288..303 CDD:275370 2/14 (14%)
zf-C2H2 315..337 CDD:395048 9/21 (43%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
CG31612NP_724363.1 C2H2 Zn finger 697..717 CDD:275368 4/19 (21%)
C2H2 Zn finger 731..750 CDD:275368 8/20 (40%)
C2H2 Zn finger 758..779 CDD:275368 5/32 (16%)
C2H2 Zn finger 804..824 CDD:275368 8/19 (42%)
C2H2 Zn finger 834..856 CDD:275368
C2H2 Zn finger 898..918 CDD:275368
zf-H2C2_2 910..935 CDD:463886
C2H2 Zn finger 926..945 CDD:275368
C2H2 Zn finger 957..984 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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