DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and Zfp182

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_036017871.1 Gene:Zfp182 / 319535 MGIID:2442220 Length:682 Species:Mus musculus


Alignment Length:344 Identity:91/344 - (26%)
Similarity:143/344 - (41%) Gaps:56/344 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FQLIEGCIVPGTFKPIKDILKY--FEKIINQRLELLPNSAA----CRDCLEYLFNYDRLVRNLSQ 78
            |.|..|.:|     |::...|:  |...:...|.||..|:.    ...|.::.|:.:  ..|.:.
Mouse   200 FHLSTGLLV-----PMQRSHKFESFGNTMVDNLNLLTGSSTENKHDTGCAKFFFHTE--YENPNF 257

  Fly    79 VQRQIADALLGCRQVEGKAETKQQAAKRARVQVPAFKIVQATALKEPERQPGEEDECEE-FMKEE 142
            :.:.     .|.::.|.....|:..:...|:             |..|| |.|...|:: |.|:.
Mouse   258 IVKP-----CGYKEYEKTLRQKKGLSLHQRI-------------KNGER-PFECTACQKTFSKKS 303

  Fly   143 MLDEEFQFSEPDDSMPSSEEEFFTETTEIP--CHICGEMFSSQEVLERHIKADTCQKSEQATCNV 205
            .|...::                |.|.|.|  |..||:.||.:..|..|::..|.::  ...|..
Mouse   304 HLIVHWR----------------THTGEKPFECSECGKAFSQKSQLIIHLRTHTGER--PFACPE 350

  Fly   206 CGLKVKDDEVLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSW 270
            ||...::...:.:|...|.|:...||..|.|.|:.|.|::.|.:.|..:|.|:|.||||.|....
Mouse   351 CGKAFREKSTVIIHYRTHTGEKPYECNQCGKAFTQKSNLIVHQKTHTGEKTYECTKCGESFIQKL 415

  Fly   271 LMYNHLMRHDAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKR 335
            .:..|...|..:: ...|..|.:.|..|.|...|.|||..::| :.|.:|.|||.:|.||.||:|
Mouse   416 DLIIHHSTHTGKK-PHECSECKKTFSDKSTLVIHQRTHTGEKP-HKCTECGKSFNEKSTLIVHQR 478

  Fly   336 VHQPVEKPESAEAKEATVT 354
            :|.. |||...:....|.|
Mouse   479 IHTG-EKPYECDVCGKTFT 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 4/19 (21%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
C2H2 Zn finger 259..308 CDD:275368 15/48 (31%)
C2H2 Zn finger 288..303 CDD:275370 5/14 (36%)
zf-C2H2 315..337 CDD:278523 11/21 (52%)
C2H2 Zn finger 317..337 CDD:275368 11/19 (58%)
Zfp182XP_036017871.1 KRAB 63..139 CDD:214630
COG5048 288..677 CDD:227381 71/231 (31%)
C2H2 Zn finger 292..312 CDD:275368 4/35 (11%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
C2H2 Zn finger 348..368 CDD:275368 4/19 (21%)
C2H2 Zn finger 376..396 CDD:275368 7/19 (37%)
C2H2 Zn finger 404..424 CDD:275368 7/19 (37%)
C2H2 Zn finger 432..452 CDD:275368 7/19 (37%)
C2H2 Zn finger 460..480 CDD:275368 11/19 (58%)
C2H2 Zn finger 488..508 CDD:275368 2/9 (22%)
C2H2 Zn finger 516..536 CDD:275368
C2H2 Zn finger 544..564 CDD:275368
C2H2 Zn finger 572..592 CDD:275368
C2H2 Zn finger 600..620 CDD:275368
C2H2 Zn finger 628..648 CDD:275368
C2H2 Zn finger 656..676 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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