DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and Zfp689

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_775452.1 Gene:Zfp689 / 286996 RGDID:628696 Length:500 Species:Rattus norvegicus


Alignment Length:203 Identity:63/203 - (31%)
Similarity:93/203 - (45%) Gaps:13/203 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 PDDSMPSSEEEFFTETTE--IPCHICGEMFSSQEVLERHIKADT--CQKSEQATCNVCGLKVKDD 213
            ||  :|:.|.....:..:  .||..||..||...:|..|.:|.:  |    ...|:.||.:....
  Rat   159 PD--LPALESHKCAQNLKKPYPCPDCGRRFSYPSLLVSHRRAHSGEC----PYVCDQCGKRFSQR 217

  Fly   214 EVLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMR 278
            :.|..|..:|.|:....|..|.:.|...|::..|...|..:|.:||..||.||:...|:..|...
  Rat   218 KNLSQHQVIHTGEKPYHCPDCGRCFRRSRSLANHRTTHTGEKPHQCPSCGRRFAYPSLLAIHQRT 282

  Fly   279 HDAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKP 343
            |..|: ...|..|.::|:.:.....|.|.|..::| |||||||:.|.....|..|:|||.. |:|
  Rat   283 HTGEK-PYTCLECSRRFRQRTALVIHQRIHTGEKP-YPCPDCERRFSSSSRLVSHRRVHSG-ERP 344

  Fly   344 ESAEAKEA 351
            .:.|..||
  Rat   345 YACEHCEA 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..251 CDD:275368 5/19 (26%)
C2H2 Zn finger 259..308 CDD:275368 14/48 (29%)
C2H2 Zn finger 288..303 CDD:275370 3/14 (21%)
zf-C2H2 315..337 CDD:278523 11/21 (52%)
C2H2 Zn finger 317..337 CDD:275368 9/19 (47%)
Zfp689NP_775452.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
KRAB 29..88 CDD:214630
KRAB 29..68 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..144
C2H2 Zn finger 151..171 CDD:275368 4/13 (31%)
COG5048 159..>466 CDD:227381 63/203 (31%)
C2H2 Zn finger 179..199 CDD:275368 7/19 (37%)
C2H2 Zn finger 207..227 CDD:275368 5/19 (26%)
zf-H2C2_2 219..244 CDD:290200 7/24 (29%)
C2H2 Zn finger 235..255 CDD:275368 5/19 (26%)
zf-H2C2_2 247..272 CDD:290200 9/24 (38%)
C2H2 Zn finger 263..283 CDD:275368 7/19 (37%)
zf-H2C2_2 276..300 CDD:290200 6/24 (25%)
C2H2 Zn finger 291..311 CDD:275368 5/19 (26%)
zf-H2C2_2 303..328 CDD:290200 12/25 (48%)
C2H2 Zn finger 319..339 CDD:275368 9/19 (47%)
zf-H2C2_2 332..356 CDD:290200 10/22 (45%)
C2H2 Zn finger 347..367 CDD:275368 3/6 (50%)
zf-H2C2_2 360..384 CDD:290200
C2H2 Zn finger 375..395 CDD:275368
C2H2 Zn finger 403..423 CDD:275368
zf-H2C2_2 416..440 CDD:290200
C2H2 Zn finger 431..451 CDD:275368
C2H2 Zn finger 459..475 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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