DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sry-beta and Zfp26

DIOPT Version :9

Sequence 1:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_011240753.1 Gene:Zfp26 / 22688 MGIID:99173 Length:965 Species:Mus musculus


Alignment Length:401 Identity:96/401 - (23%)
Similarity:154/401 - (38%) Gaps:115/401 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GCIVPGTFKPIKDILKYFEKIINQRLELLPNSAACRDCLEYLFNYDRLVRNLSQVQRQIADALLG 89
            |.::| |.|      ||:|               |:.| |..|.:. :..|: .:|....:....
Mouse   340 GHVIP-TEK------KYYE---------------CKKC-EKFFTHP-VYLNI-HMQSHTVEKPYD 379

  Fly    90 CRQVEGKAETKQQAAKRARVQVPAFKIVQATALKEPERQPGEE-DEC----------EEFMKEEM 143
            |::. |||.|::.:.           ||.   |::..|:...| .||          .|.|:...
Mouse   380 CKEC-GKAFTERSSL-----------IVH---LRQHTREKSYECKECGKTFIQPSRLTEHMRSHT 429

  Fly   144 LDEEFQFSEPDDSMPSS------------EEEF-------------------FTETTEIP--CHI 175
            .::.:|..:..::..||            |:.|                   .|.|.|.|  |.:
Mouse   430 GEKPYQCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTHTGEKPYECKV 494

  Fly   176 CGEMFSSQEVLERHIKADT------CQKSEQA--------------------TCNVCGLKVKDDE 214
            ||:.||.:..|..|::..|      |.:.|:|                    .|.||....::..
Mouse   495 CGKAFSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNSS 559

  Fly   215 VLDLHMNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKKYQCDKCGERFSLSWLMYNHLMRH 279
            .|..|..:|.|....:|.||.|.|:.:..:.:|:.:|..:|.|:|.:||:.||.|..:..|:..|
Mouse   560 CLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLVEHIRIH 624

  Fly   280 DAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKPE 344
            ..|: ...|..|.:......:...|||||..::| :.|..|:|:|.....|::|.|.|.. ||| 
Mouse   625 TGEK-PFECYQCGKALAHSSSLVGHLRTHTGEKP-FECNQCDKTFTRSSYLRIHMRTHTG-EKP- 685

  Fly   345 SAEAKEATVTF 355
             .|.||...||
Mouse   686 -YECKECGKTF 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..308 CDD:275368 14/48 (29%)
C2H2 Zn finger 288..303 CDD:275370 2/14 (14%)
zf-C2H2 315..337 CDD:278523 7/21 (33%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
Zfp26XP_011240753.1 KRAB 113..171 CDD:214630
C2H2 Zn finger 297..317 CDD:275368
COG5048 325..760 CDD:227381 96/401 (24%)
C2H2 Zn finger 352..372 CDD:275368 6/22 (27%)
C2H2 Zn finger 380..400 CDD:275368 8/34 (24%)
C2H2 Zn finger 408..428 CDD:275368 4/19 (21%)
C2H2 Zn finger 436..456 CDD:275368 2/19 (11%)
C2H2 Zn finger 464..484 CDD:275368 0/19 (0%)
C2H2 Zn finger 492..512 CDD:275368 7/19 (37%)
C2H2 Zn finger 520..540 CDD:275368 3/19 (16%)
C2H2 Zn finger 548..568 CDD:275368 5/19 (26%)
C2H2 Zn finger 576..596 CDD:275368 6/19 (32%)
COG5048 600..956 CDD:227381 35/101 (35%)
C2H2 Zn finger 604..624 CDD:275368 7/19 (37%)
C2H2 Zn finger 632..652 CDD:275368 5/19 (26%)
C2H2 Zn finger 660..680 CDD:275368 7/19 (37%)
C2H2 Zn finger 688..708 CDD:275368 4/8 (50%)
C2H2 Zn finger 716..736 CDD:275368
C2H2 Zn finger 744..764 CDD:275368
C2H2 Zn finger 772..792 CDD:275368
C2H2 Zn finger 800..820 CDD:275368
C2H2 Zn finger 828..848 CDD:275368
C2H2 Zn finger 856..876 CDD:275368
C2H2 Zn finger 884..904 CDD:275368
C2H2 Zn finger 912..932 CDD:275368
C2H2 Zn finger 940..956 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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